Gene Bphy_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3597 
Symbol 
ID6245143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp543438 
End bp544715 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID642595370 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001859782 
Protein GI186472440 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGCT ACTACGAAGC GACCGTCGAG CGTCCCGTGC GCCCTGCGCT GCACGGACAA 
CTGAGCGCGA ATGTCTGCGT CGTCGGCGGC GGGCTGGCGG GCCTGTCGAC GGCGCTGGGA
TTGGCCGAGC GCGGCGTACG CGAGGTCGTC GTGGTCGAAG CGAAGCAGGT CGGCTACGGC
GCGTCGGGCC GCAATGGCGG CTTCGTGTTC GGCGGCTACA GCCTCGATTG CGCGGACCTG
TTGCGAATTC TCGGGCCTGC GCGGGCGCGC GAACTCTACG CGTTGACCAT CGACGCCGTC
GATCTGATGC GTGCGCGGAT CCAGCGTTAC GCTATCTCCT GCGACGCGAC CGATGCGGGC
GTGATCCTCG CGAACTGGTT CGACGATCCG TCGCGGCTCG ACAGCCAGCG CCGCCTGATG
AAGGAAGCGT TCGACGTCGA ATGGGAACCG CTCGGCGCCG CCGAGCTGAG CGCGCGCCTG
AAGACGACGC GTTATCACGG TGGACTGTTC GAGCGCAACG CCTTTCACTT TCATCCATTG
AAGTATGTGC TGGGTGTCGC GCGCGCCGCC GAAGCAGCCG GCGTGCGGAT CGTCGAGCAG
TCGCCCGTCA CGTCGCTACG CCGGCACGGC GCGGGGTTTG CCGTCGAGAC GGCGCACGGC
ACCATCGACG CCCGGCACGT CGTGATGGCG GGCGGCGGCT ATGCGCGCAA TGTGTACCGG
CGCGTCGAGC GCGCGGTGCT GCCTGTCGCC ACCTACGTGA TGGCGACAGA GCCGCTCGGC
GCGGGGCTGG CCGATGCGAT CGCCTGTCCT TCCGCCGTCT ACGACACGCG CTTCGCCTTC
GACTACTATC GGCCGCTGCC CGACACACGC ATCCTGTGGG GCGGACGCAT TTCGATTCGG
GAACGCGAGC CCGAAGTCAT CGCGCGGCTG TTGCGCCGCG ATTTGCTGAA AGTGTATCCG
CAGTTGCGCC ACGTGCGCAT CGAGCATGCG TGGGGCGGTC TGATGAGTTA CGCGCGGCAC
AAGATGCCGC AGATCGGCCG CAGCGGTGAC GGCGTCTGGT ACGCGGTCGG CTTCGGCGGA
CATGGAATGG CGCCGACCAC GGTGTCGGGC GAACTGCTGG CGGCCGCCAT CGCGGGCGAA
CGCCCGGTGC CCGAAGCGTT CGCCTCGTTC GGTCTCACGC ACACATTCGG CGCGCTGGGG
CTCGCCGCCG CGCAACTGAG CTACACGGCG ATGCAGACGC GCGATGCACT CGCCGACCGG
CCACGGCGCC CGCGCTGA
 
Protein sequence
MHSYYEATVE RPVRPALHGQ LSANVCVVGG GLAGLSTALG LAERGVREVV VVEAKQVGYG 
ASGRNGGFVF GGYSLDCADL LRILGPARAR ELYALTIDAV DLMRARIQRY AISCDATDAG
VILANWFDDP SRLDSQRRLM KEAFDVEWEP LGAAELSARL KTTRYHGGLF ERNAFHFHPL
KYVLGVARAA EAAGVRIVEQ SPVTSLRRHG AGFAVETAHG TIDARHVVMA GGGYARNVYR
RVERAVLPVA TYVMATEPLG AGLADAIACP SAVYDTRFAF DYYRPLPDTR ILWGGRISIR
EREPEVIARL LRRDLLKVYP QLRHVRIEHA WGGLMSYARH KMPQIGRSGD GVWYAVGFGG
HGMAPTTVSG ELLAAAIAGE RPVPEAFASF GLTHTFGALG LAAAQLSYTA MQTRDALADR
PRRPR