Gene Bphy_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3593 
Symbol 
ID6245139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp536894 
End bp537883 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content63% 
IMG OID642595366 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001859778 
Protein GI186472436 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.225998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTC CCACCGTTCC CGCTCACAGC CACCGCCGGT TGGCGGATCA TCTGCCGACG 
CTTGCAGAAG CGGGCCCGTT GATCGCACTC GTGATCGCGT GCATCTTCTT CATCTCGCAG
AGCAACCGTT TTCTATCGTT CCAGAACCTG TCGCTGATCC TTCAGCAGAC CATGGTGGTC
GCCGTCATAG CGATCGGCCA GACACTCATC GTACTGACGG GCGGCATCGA TCTGTCGTGC
GGGATGGTGA TGGCGCTCGG CTCGATCGTG ATGACAAAGT TCGCCGTCGT GATGGGCGTC
CCGCCGGTGA TCGCGATCGT GTGCGGCGTC GGCGCGAGCA CGCTGTTTGG TCTGCTGAAC
GGCGTGCTCA TCACGCGCAT CAAGCTGCCC GCGTTCATCG TCACACTGGG CACGCTGAAT
ATTGCATTCG CCGTCACGCA GATCTATTCG AACGCTGAGA GCGTATCGAA TCTGCCCGAC
GCGATCATGT TCTTCGGCAA CACGTTCAAT CTCGGACCCG CAACCGTCAC GTACGGCACC
GTGCTCACGC TGCTGATGTA CCTCGCGACG TGGTTCGTGC TGCGCGACAC CGTGCCAGGC
CGCCATCTCT ACGCACTCGG CAACAACCCC GAAGCCGCGC GCCTGATGGG CCTTTCCGCG
CAGCGCATCC TGATCACCGT CTACACGCTG TCGGGTGCGA TCTACGGCAT CGCCGCACTG
CTGGCCGTGT CGCGCACGGG GGTCGGCGAT CCGCAAGCGG GCCAGACGGA AAACCTCGAC
AGCATCACGG CTGTCGTGCT GGGCGGCACG AGCCTGTTCG GCGGACGCGG CTCGATTGCA
GGCACGCTGC TGGGCGCATT GATCGTCGGC GTGTTCCGCA ATGGCTTGAC GCTGATGGGC
GTGTCGTCGG TGTACCAGGT GCTCATCACC GGCATTCTCG TGATTCTCGC AGTCGCCGCC
GACAAACTGT CGCGCCGTGG CGCACGTTGA
 
Protein sequence
MSTPTVPAHS HRRLADHLPT LAEAGPLIAL VIACIFFISQ SNRFLSFQNL SLILQQTMVV 
AVIAIGQTLI VLTGGIDLSC GMVMALGSIV MTKFAVVMGV PPVIAIVCGV GASTLFGLLN
GVLITRIKLP AFIVTLGTLN IAFAVTQIYS NAESVSNLPD AIMFFGNTFN LGPATVTYGT
VLTLLMYLAT WFVLRDTVPG RHLYALGNNP EAARLMGLSA QRILITVYTL SGAIYGIAAL
LAVSRTGVGD PQAGQTENLD SITAVVLGGT SLFGGRGSIA GTLLGALIVG VFRNGLTLMG
VSSVYQVLIT GILVILAVAA DKLSRRGAR