| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3507 |
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| Symbol | |
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| ID | 6245063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 442903 |
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| End bp | 444375 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642595290 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001859702 |
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| Protein GI | 186472360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.383608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGGC GCAGCGCAGC CGCCGCGGCG GTTGTGTCGC TGGCGCTTCT TCTGGCAAGT
TGCGCGACGC CAGTGATGCA GCCTGCGATC GAGGTTCCCG GGCGGTTCGC GGCTGCGTCC
GCATCTGCGG AGGAGCCGGA GGCCGCTTGG TGGGATAGCT ATGGCGATCC GGTGCTTTCC
GATCTGGTCC GTCGGGCGGC GCAGGAGAAC CGGGACGTCC GGATCGCGGC GGAGCGCGTG
CGGGCCGCGA GGGCCGGAGA AACAATCAGT CGTTCGTGGC TCCTGCCAAC TTTGAGCGTT
GGTGCCATGG GTTTTAACCA CACGACGAAC TACGATACCG TCCTCAAAAA CTTCGTTCCC
GAAGCGGCAA ATACGCGAGC GGGACAGGTC GGTATCGGTG CCTCGTGGGA AGTTGACGTC
TTCGGCCGGC TGCGGGCGGG TGCGGCCGCG GCTGCAGCCG ACACGATCGC AGTTCAGAAT
ACCGCGCGCG GCGTGCGCCT TCTTGTGCTG ACCGATGTCG CCACGAATTA CTTTACACTC
GTCGGCGCAT TGCGACAGCT CGAAACCGTA CGCGCAATAT CGGCTGCACA GGACGAGACG
CTGCGCCTGG TGACCGCCCG CGAACGCGTC GGCCTCGCGA CTCCATTCGA CGTTGAGCGC
GTGAAGACGG AAGCTTCAAG AACGCACGCG GCCATACCGC CGCTTGAGAC CCTGGCCGCC
GTCTCGCGCC ATCACATTGC GGTGCTCGTA GGAGATCAGG CTTCCAATGC GGCGAGCATC
ACGCCATCGG GCGTCGGAGC GATCGTTCCG CCCGCACGTC CGGGGCAACC GGCCACCCTG
TTGCAGCGGA GGCCGGATCT GCTCGTCGCA AGCGCACAGC TTGACGCGGC CAATGCGCGC
CGGCAACAGG CGATGGCGGA ATGGTTTCCG CGTCTATTTC TCGGCGCGGT GTTCGGCCGT
GAGTCCATCG ATCTCAACGG GATTGCGCTC GGTCCGGCGC GCTTCAGCAA CGTCGCCGGC
CTCATCGCGA TGCCCATCTT CAATGCGGGG CGGACGCAGG CGATCAACGA CATCGCCGAA
ATCGGTCAAA AGGAAGCGGT CCTACATTAT GAGGACGCCA TCGTACGCGC GCTCGAAGAC
GTCGAGAACG CGCTGGTCGC GCTCGACGAC GAACGTCAAC GTGCGCAACT GCTGGAGAAC
GCCGCGACTA CGGCCGAAGC GGCGCTGGGC CGCGCGCAGT CCCTCTATAA CCGCGGCCAG
ACCGATCTTC TGCCGCTGCT CGATGCCCAA CGGACCCGGT TGGCCGTCCG TGCAATCGCT
AACGACAGCA GCACGCAATT GCTGCTCGAC AGCGTTCAAC TGTACAAGGC GCTTGGCGGA
GGCTGGGAGG TGTTCGAGGC CGCTCCCGCT CCTGACGGCA CAGCACCTTC CCACAGTTCG
TCAAACGTGG ATCGGGACGA GGGACCATCA TGA
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| Protein sequence | MAGRSAAAAA VVSLALLLAS CATPVMQPAI EVPGRFAAAS ASAEEPEAAW WDSYGDPVLS
DLVRRAAQEN RDVRIAAERV RAARAGETIS RSWLLPTLSV GAMGFNHTTN YDTVLKNFVP
EAANTRAGQV GIGASWEVDV FGRLRAGAAA AAADTIAVQN TARGVRLLVL TDVATNYFTL
VGALRQLETV RAISAAQDET LRLVTARERV GLATPFDVER VKTEASRTHA AIPPLETLAA
VSRHHIAVLV GDQASNAASI TPSGVGAIVP PARPGQPATL LQRRPDLLVA SAQLDAANAR
RQQAMAEWFP RLFLGAVFGR ESIDLNGIAL GPARFSNVAG LIAMPIFNAG RTQAINDIAE
IGQKEAVLHY EDAIVRALED VENALVALDD ERQRAQLLEN AATTAEAALG RAQSLYNRGQ
TDLLPLLDAQ RTRLAVRAIA NDSSTQLLLD SVQLYKALGG GWEVFEAAPA PDGTAPSHSS
SNVDRDEGPS
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