| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3287 |
|---|
| Symbol | |
|---|
| ID | 6244718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 214220 |
|---|
| End bp | 215215 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595077 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001859489 |
|---|
| Protein GI | 186472147 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.242748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAG ACATTTCGTT TCTGCTGCTG CCCGGCTTTT CGGCCATCGG TTTCATGTCA
GCCATCGAGC CTTTGCGCGT CGCGAACCGC TTTCGCGAAG ATCTGTACCG CTGGCACATA
TTGAGCGTGG ATGGCGCGCC CGTCAGCGCG AGCAACGGCA TTTCACTGAA TGCCGAAGCC
GCATTCGGCG ATGTGCATCA CGCGTCGACC GTCTTTGTCG TAGCGGGCTT CGAACCGCTC
GCGTGCTATA GCCGCGCGCT CGCTGACTGG CTCAAGCGGA TGGATCGCGC CCAGGCGACG
TTGGGCGGCA TCGACACAGG CGCATTCATT CTGGCGGAAG CGGGACTGGT GCGCGCGACG
GACAGCGTGA CACTGCATTG GGAAGCACTC GCCGCGTTTC GCGAGCGCTA TCCGTCCATG
CAGGCCAGCG ACGAGCTGTT CGAAATCGGC GAGCGGCGCA TTACCTGCGC CGGCGGCACT
GCGTCGATCG ACATGATGCT CGATCTGATC TCTCGCAACC ACGGCGCCGC GCTCGCTTCG
GCGATCTCCG AGCAGTTCGT CGTGAGCCGC ATCCGGCAGC GGTCCGATCA TCAGCGCATG
GAAATCGCCG CGCGCTACGG CGTGCACAAT CGCAAGCTGA TTCAGGTGAT CGGCGTGATG
GAACAGAACA TGGAAGAGCC GCTTGCGCCT GCCGATCTGG CGCAGGAAAT CGGCGTCACG
CGCAGGCAGC TAGAACGGCT CTTCTGCTCA TCGCTAAAGG ACACGCCGAC ACATTTCTAT
CTGCAATTGC GGCTCGACCG CGCGCGGGAG CTTTTGCGGC AAACAGACAT GTCGATCACG
GCGATCTGCG TCGCATGCGG ATTCGAATCG CCCTCGCATT TTTCGCGGAC CTATCGTGCG
CGTTTCGGCA CGAGTCCGCG CAGCGACCGC AGTCCGCCGC ATCACGGTGC GGGCGGCAGG
ACGACGCATT CGACACGCGA GGCCGCCATA CCGTGA
|
|---|
| Protein sequence | MPEDISFLLL PGFSAIGFMS AIEPLRVANR FREDLYRWHI LSVDGAPVSA SNGISLNAEA
AFGDVHHAST VFVVAGFEPL ACYSRALADW LKRMDRAQAT LGGIDTGAFI LAEAGLVRAT
DSVTLHWEAL AAFRERYPSM QASDELFEIG ERRITCAGGT ASIDMMLDLI SRNHGAALAS
AISEQFVVSR IRQRSDHQRM EIAARYGVHN RKLIQVIGVM EQNMEEPLAP ADLAQEIGVT
RRQLERLFCS SLKDTPTHFY LQLRLDRARE LLRQTDMSIT AICVACGFES PSHFSRTYRA
RFGTSPRSDR SPPHHGAGGR TTHSTREAAI P
|
|---|
| |