Gene Bphy_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3230 
Symbol 
ID6247034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp148252 
End bp149355 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content59% 
IMG OID642595023 
Producttransposase IS4 family protein 
Protein accessionYP_001859435 
Protein GI186472093 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.431126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCG TCGACACGTT CACCGAGAAT CTGTTTTCCG TGCGCAAGTT GGACGATTTC 
GTTCCGACCT CGCATCCGCT GCGCTCGATT CGCGTTATGG CGAACGAAGC GCTGGCGAAG
ATGGATCGGA TCTTTGCCGG GATGTATGAG GCCGACATCA AGGGAGGCCG GCCGAGCATC
GCGCCAGAGA AGCTGTTGCG TGCGATGCTG CTGCAGGTGC TATACAGCAT CCGATCCGAG
CGTCAGCTCA TGGAGCAAAC GCAATACAAC CTGCTGTTTC GGTGGTTTAT CGGTCTGTCA
ATGGATGATT CGGTCTGGGT GCCGACGGTG TTCACGAAGA ACCGCGAGCG ATTGATCAGG
CACGATGCGG TGGTCGAATT TTTCAACGAA GTGCTGTCCA TCGCGCAGAA GAAGAACTGG
CTGTCGGGCG AGCACTTTAG CGTCGACGGC ACACTGATCC ACGCATGGGC AGGACACAAG
AGTTTTGTGC GCAAGGACGG TGAAGAGGAC AGGGATAACG ACGGTGGCAG CGGCGAGGGA
GGCTTCAAGG GTAGCAAGCG AAGCAACGAA ACGCACGAGT CGAAGACCGA TCCCGATGCA
CGGCTTTACC GCAAGGGCAA GACGGCCAGC GAATTGCGTT ATATGGGCCA CACGCTGACC
GACAACCGCC ACGGGCTGGT GGTCAACGCC CGCGTGAGTC GCGCTGACGG ACACGCGGAA
CGTGAAGCGG CGAAGGTCAT GATCAATGAT GCGCGGCAGG CAGCGAACGA TGCAGCGGCA
CAAATCACAC TGGGTGCGGA CAAGGGTTAC GACGCACAGG AATTCATCGA AGCTTGCCAG
CAGATGAAGG TCACGCCGCA CGTGGCACAG AACACCTCCG GCCGCCGTTC GGCGGTGCCC
GATGCGATTG CGCGCAGCGT CGGCTACGCG ATATCGCAGC AAAAGCGAAA GCTGATCGAA
CAAGGTTTTG GATGGGCGAA GACTGTGGGG CGCATGCGTC AAGTGATGGT ACGCGGGTTG
AAGAAAGTCG ACCAAATGTT TGTGTTGAAC ATGGCCGCGT ACAACCTCGT GCGCATGCGT
TCGCTAGGAC AGGCACGCCC GTAA
 
Protein sequence
MRGVDTFTEN LFSVRKLDDF VPTSHPLRSI RVMANEALAK MDRIFAGMYE ADIKGGRPSI 
APEKLLRAML LQVLYSIRSE RQLMEQTQYN LLFRWFIGLS MDDSVWVPTV FTKNRERLIR
HDAVVEFFNE VLSIAQKKNW LSGEHFSVDG TLIHAWAGHK SFVRKDGEED RDNDGGSGEG
GFKGSKRSNE THESKTDPDA RLYRKGKTAS ELRYMGHTLT DNRHGLVVNA RVSRADGHAE
REAAKVMIND ARQAANDAAA QITLGADKGY DAQEFIEACQ QMKVTPHVAQ NTSGRRSAVP
DAIARSVGYA ISQQKRKLIE QGFGWAKTVG RMRQVMVRGL KKVDQMFVLN MAAYNLVRMR
SLGQARP