| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3048 |
|---|
| Symbol | |
|---|
| ID | 6244528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 3424594 |
|---|
| End bp | 3425349 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642594851 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001859263 |
|---|
| Protein GI | 186477793 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG TGAGCGAACA GGAAAACGCA TCAGTCAGTG TCGTGAGCGG CGAGCCCGCG
CTGGAGATCG CCGGATTGCA GGCGTGGTAC GGCGAGTCGC ACATTCTGCA TGGCGTCGAT
CTGACCGTGA GCCGAGGCGA AGTCGTCACG CTGCTGGGTC GCAATGGCGC GGGCCGCACC
ACGACGCTGC GCGCGATCAT GGGCTTGACG GGGCGCCGCA CGGGCTCGAT TCGCGTCGGC
GGACGCGAGA CCATATCGAT GCCGACGCAT CGAATTGCCC ATTGCGGCGT CGGCTATTGT
CCGGAAGAAC GCGGTATTTT TTCGAGCCTG TCGTGCGAAG AGAATCTGCT GCTGCCGCCG
CCCGTCGGCG ACAAGTCGTT GATGATGTCG ATCGACGAGA TTTACCAGAT GTTTCCCAAT
CTCCAGGAAC GGCGCATGAG CCAGGGCACG CGGCTGTCAG GCGGCGAGCA GCAGATGCTG
GCCGTCGCGC GCATCCTGAG AACGGGTGCG AACCTGCTGT TGCTCGATGA AATCTCGGAA
GGTCTCGCGC CTGTGATCGT GCAGGCCCTC GCGCGCATGA TCGTGACGCT GAAAGCCCGC
GGCTACACGA TCGTGATGGT CGAACAGAAC TTCCGCTTTG CCGCGCCGCT AGCGGATCGT
TTCTATGTGA TGGAGCACGG ACGCATCGTG GAGCATTTCG GTGCAAAGGA ACTCGAAAGC
AAAATGCCGG TGCTGCACGA TTTGCTCGGG GTATGA
|
|---|
| Protein sequence | MSTVSEQENA SVSVVSGEPA LEIAGLQAWY GESHILHGVD LTVSRGEVVT LLGRNGAGRT
TTLRAIMGLT GRRTGSIRVG GRETISMPTH RIAHCGVGYC PEERGIFSSL SCEENLLLPP
PVGDKSLMMS IDEIYQMFPN LQERRMSQGT RLSGGEQQML AVARILRTGA NLLLLDEISE
GLAPVIVQAL ARMIVTLKAR GYTIVMVEQN FRFAAPLADR FYVMEHGRIV EHFGAKELES
KMPVLHDLLG V
|
|---|
| |