| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2980 |
|---|
| Symbol | |
|---|
| ID | 6244461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 3338339 |
|---|
| End bp | 3339403 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642594783 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001859196 |
|---|
| Protein GI | 186477726 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.172457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000269533 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATCG CACAAATCGC ACCGTTGTAC GAAGCTGTCC CACCGAAACT CTATGGCGGC
ACAGAACGCG TCGTGTCATA TCTGACCGAG GCGCTGGTCG ATCTGGGGCA CGATGTGACG
CTCTTCGCGA GCGGCGATTC GGTGACGTCC GCGAAACTCG AAGCCGCGTG GCCGCGTGCG
CTGCGTCTGG ATCCGACGAT CCGCGACGCG CTCGCGCCGC ACATGCTGCT GCTCGAGCGG
GTGCGAAAGA TGGCCCACGA ATTCGACGTG CTGCACTTTC ACCTTGACTA TCTGCCATTC
CCGCTGTTCT CGACGCTGGA TACGCCGTAC GTGACAACGC TGCACGGCCG CCTGGATCTG
CCCGAACTGC AGCCGGTGTT CGACACGTTC GAAAATGCGC CCGTGATCTC GATTTCGGAT
TCACAACGGC TGCCGCTGCA GCAGGCCAAC TGGCTCAACA CCATCTATCA CGGCCTGCCG
GACGAGCTGT TGACGCCGCA AGCCGGCAAG AAGCCTGAAT ATCTGGCGTT TCTCGGCCGT
ATCTGTCCCG AAAAGCGCGT CGATACCGCC ATCAAGATCG CCGCGCAAAG CGGTTTGCCG
CTGAAGATCG CCGCCAAAGT GGACAAGGTC GACCAGGAGT ACTTCAGAAC GGAAATCGAG
CCGCTGCTGT CGCAGGCGCA CGTCGAGTTC ATCGGCGAGA TCAACGAAGC GCAGAAGCCG
GAATTCTTGT CAGGTGCGAA GGCACTGCTG TTCCCGATCG ACTGGTCGGA GCCGTTCGGC
CTCGTAATGA TCGAATCGAT GGCGTGTGGC ACGCCCGTGA TCGCGTTCAA CCGCGGTTCG
GTGCCGGAAG TGATCGACCA GGGCGTGACG GGTTTCATCT GTGAAGACGT GCAGGGCGCC
GTGGCGGCGC TGCAGCGTAT CGACGAACTG TCGCGCACGG AAATCCGCGC GCAATTCGAG
CGCCGCTTCA GCTCGAAGAT CATGGCGCAG AACTATGTGG ACAGCTACAC CGCGCTGCTC
GAAGCGACGC GCCGTCCCAT GCTCCGCCGC GTGGCGGTGG GCTGA
|
|---|
| Protein sequence | MRIAQIAPLY EAVPPKLYGG TERVVSYLTE ALVDLGHDVT LFASGDSVTS AKLEAAWPRA
LRLDPTIRDA LAPHMLLLER VRKMAHEFDV LHFHLDYLPF PLFSTLDTPY VTTLHGRLDL
PELQPVFDTF ENAPVISISD SQRLPLQQAN WLNTIYHGLP DELLTPQAGK KPEYLAFLGR
ICPEKRVDTA IKIAAQSGLP LKIAAKVDKV DQEYFRTEIE PLLSQAHVEF IGEINEAQKP
EFLSGAKALL FPIDWSEPFG LVMIESMACG TPVIAFNRGS VPEVIDQGVT GFICEDVQGA
VAALQRIDEL SRTEIRAQFE RRFSSKIMAQ NYVDSYTALL EATRRPMLRR VAVG
|
|---|
| |