Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2587 |
Symbol | |
ID | 6244070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2924299 |
End bp | 2924850 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642594376 |
Product | rare lipoprotein B |
Protein accession | YP_001858805 |
Protein GI | 186477335 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.890824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000000573442 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACTCGCA GATCGTTTTT GACTCTGGCG TGCAGCGCGG CGCTGCTGTC CGCGTGCGGC TTCCAGCTGC GCGGCCAGCA GGACTACGCG TTCAAGCGCC TCGCCATCTC GGGTGGGTCG GGCGCCGTCG CCGCACGCCT GACGCGCCTG GTTCAGGGTG GCAGCGACAC GGTGATCGTG ACGTCGCCGG CTAATGCCGA TGCCATCCTC TCGATCTCGG AAGGGCGCGG AACGGCCGTG CTGACGCTGA ATTCGCTCGG CGTGGTGGAA GAGTACGCGC TGAATTACTC GCTGAACTAC ACGCTGCGCG GCGCGGACGG CACGTTGCTG ATTCCGCCCA GCTCGATCGC GCTGAATCGC GCGATGACCT ATAGCGATCA GTTTTCGCAG GCGAAGTCCT CCGAAGCGGA CATCCTCTAC GCCGACATGC AGAACGACGC CGTCGATCAG CTGATGCGGC GTCTGTCCGT CGTGAAGTCG CTGCATCCGG CGCCGGGACA GGAAGTGCCG GGCATCTCGC CGCGCGCGCC GCTGCCGCCG CCACCGCTTT GA
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Protein sequence | MTRRSFLTLA CSAALLSACG FQLRGQQDYA FKRLAISGGS GAVAARLTRL VQGGSDTVIV TSPANADAIL SISEGRGTAV LTLNSLGVVE EYALNYSLNY TLRGADGTLL IPPSSIALNR AMTYSDQFSQ AKSSEADILY ADMQNDAVDQ LMRRLSVVKS LHPAPGQEVP GISPRAPLPP PPL
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