Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2571 |
Symbol | |
ID | 6244054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2891166 |
End bp | 2891843 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642594360 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001858789 |
Protein GI | 186477319 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.412462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0437286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCATT TCGACTGGAG CGGTATTCCG GGCGCACTGC CGACGCTGTG GACGGGTGCC ATCGTCACGC TCAAGATCAC GATTCTCGCG ATTGTGATCG GCATCGTGTG GGGGACCGTG CTCGCGCTGT TGCGCCTTTC GGGCATCAAG CCGCTGGAGT GGTTTGCGAA ACTTTACGTG ACGCTATTCC GCTCGATCCC GCTGGTGATG GTGCTGCTGT GGTTCTTCCT GATCGTGCCG CAGGTGCTGC AGAACGTGCT GGGCCTTTCC GCGGACATCG ACATTCGCCT CGCCTCGGCG ATGGTCGCGT TCTCGCTGTT CGAAGCCGCG TACTATTCGG AAATCATCCG TGCGGGTATT CAGGCCGTGC CGCGCGGGCA AGTAAACGCG TCGTACGCGC TCGGCATGAG CTATCCGCAG GCGATGCGTC TCGTCGTGCT GCCGCAGGCG TTCCGCGCGA TGGTGCCGCT GCTGCTCACG CAGGCCATCG TGCTCTTTCA GGATACGTCG CTCGTCTACG TGATCAGCCT CGCCGACTTC TTCCGCACGG CCACGAATAT TGGCGACCGT GACGGTACGA ACGTCGAGAT GGTACTGTTC GCCGGTGCGT GTTACTTCGT GATCTGCGTG GTCGCGTCGA GCCTCGTCAA AAGTCTTCAG AAAAAGGTCG CAAGATGA
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Protein sequence | MHHFDWSGIP GALPTLWTGA IVTLKITILA IVIGIVWGTV LALLRLSGIK PLEWFAKLYV TLFRSIPLVM VLLWFFLIVP QVLQNVLGLS ADIDIRLASA MVAFSLFEAA YYSEIIRAGI QAVPRGQVNA SYALGMSYPQ AMRLVVLPQA FRAMVPLLLT QAIVLFQDTS LVYVISLADF FRTATNIGDR DGTNVEMVLF AGACYFVICV VASSLVKSLQ KKVAR
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