| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2381 |
|---|
| Symbol | |
|---|
| ID | 6243867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2674509 |
|---|
| End bp | 2675771 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642594172 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001858602 |
|---|
| Protein GI | 186477132 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.916996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTA TTACTTCACA GCAACAGAGC TGGCACACGC GCCAGCTCAA GAAATCACTG
CGAGCCGTGC AGTTGCGTAA GGAAGCCGCT GCGGTCGCAT TGGTGGCGCC GCTTGCCCTC
TTTATCCTGC TGGTGTTTGT GATGCCGGTC GCGTCGATGA TCTCGCGTTC GATTCAAAGT
CCCGAGGTTG TTGACGCGTT ACCGAAGACA ACCTCGGCCT TGAGACATTG GGATCGCAAG
TCGACCGTTC CCGATGAGGC TTACCGTGCG CTGATGCTTG ACGTGGAAGG CAACGGAGGA
AATAACGAGG CGGGTAGCGC GGCGGGCAGA CTGAATGGCC AAAAGGATGG TTTTCGCTCG
TTGTTTTACA AGACGACCAG TGCGCTTCCT TTTGGGGATA ACGATGCGGC GCTTTCCGCA
CAGGAGGTAA AGAAACGCCT GATCGATATC GACTCCCGCT GGGCAGACGC GATTTACTGG
CGAGCGATCG CCAACGAATC ATCACGTTAT ACGAGCCAGT ATCTCCTCGC CACGATCGAC
TTTCGAGAAA CGCCTGATGG TCGCATCACG CCGGTAGAGA ACGGTGCATC CGCATACCGC
GCAGTGTTCA TGCGTACCTT CGTGATTAGC GGACTGGTGA CGCTCGCGGC GCTGTTACTG
GGTTTTCCGC TCGCCTACTG GATCTCGATT CTGCCGGCAC GAAAGGCGAA TCTCGTGATG
ATCCTCGTGC TGCTTCCGTT CTGGACGTCG ATTCTCGTTC GGATTTCGGC GTGGATCGTG
ATTCTCCAGG GAGCGGGTCT TGTCAACAAG GCGTTGATGG CGCTGCATGT GATTTCGACG
CCGCTGCCAC TCCTGTTCAA CAGGACGGGG GTGCTGATTT CCATGACCCA TATCCTGCTG
CCGTTCATGA TTCTGCCACT CTACAGCGTC ATGAAGTCCA TCCCGTCGAG CTATACAAAA
GCCGCGATCT CTCTTGGAAG TCATCCGTTC GGGGCATTCT GCAAGGTCTA TGTGCCGCAG
ACGCTTCCCG GTGTCGGGGC GGGCGCCCTG CTGGTGTTCA TCACCGCGCT GGGCTATTAC
ATCACGCCAG CGTTGCTAGG CGGTGCAGGC GATCAGATGG TCAGCTACTA CATCGCGTAT
TTCACCAACA TGGCCCTGAA CTGGGGCATG GCGTGTGCGC TTGGCGCGGT TCTCCTACTA
GTGACGCTGA TCCTGTTCAG CGTCTATCGA AGGGTCGTCG GTAAAGAACT GAAGGTGGCC
TAG
|
|---|
| Protein sequence | MSAITSQQQS WHTRQLKKSL RAVQLRKEAA AVALVAPLAL FILLVFVMPV ASMISRSIQS
PEVVDALPKT TSALRHWDRK STVPDEAYRA LMLDVEGNGG NNEAGSAAGR LNGQKDGFRS
LFYKTTSALP FGDNDAALSA QEVKKRLIDI DSRWADAIYW RAIANESSRY TSQYLLATID
FRETPDGRIT PVENGASAYR AVFMRTFVIS GLVTLAALLL GFPLAYWISI LPARKANLVM
ILVLLPFWTS ILVRISAWIV ILQGAGLVNK ALMALHVIST PLPLLFNRTG VLISMTHILL
PFMILPLYSV MKSIPSSYTK AAISLGSHPF GAFCKVYVPQ TLPGVGAGAL LVFITALGYY
ITPALLGGAG DQMVSYYIAY FTNMALNWGM ACALGAVLLL VTLILFSVYR RVVGKELKVA
|
|---|
| |