| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2205 |
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| Symbol | cobD |
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| ID | 6243691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 2479369 |
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| End bp | 2480310 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642593996 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001858426 |
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| Protein GI | 186476956 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0351195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.625062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCTCC TGTCCCTGCC CTTCGTCGCG ACACTCGCCA CGGCAGCCGT CGCCGTGGAC
AGATGGCTCG GCGAGCCCGA GCGCGGGCAT CCCCTCGTCG CTTTCGGCAA GCTGGCCGCG
AAGATCGAAG TCGCGCTGAA CACCGGGCGG CGCGGCCGGC TGCTGGGCAT CGTCGCGTGG
CTGCTCGCCG TCGCGCCGCC CGTTCTGGCC GCGACCTGGC TCGTGCTCGT GCTGCCGTTC
ATGTGGGCGT GTGCCGTGCA TGTCGCGCTG CTCTACTTCG CGCTCGGCGC ACGCAGTCTG
CACGATCACC TCGAGCCGAT CGGCCGTGCG CTCGCGAAGC GCGATCTTGC CCAGGCGCGC
ATCTTGACGG CGCGCATCGT GTCGCGTGAG ACGTCGCACG CCGACGAAAG CGCGCTGTCG
CGCGCCGCCG TCGAGTCGGC TCTCGAGAAC GGCAACGATG CGATCTTCGG CGCGCTGTTC
TGGTTCGCGA TTTTCGGCGG CCCGGGCGCG CTAGCCTTTC GTCTTGCGAA CACGCTCGAT
GCGATGTGGG GTTATCGTAC GCCGCGCTAT CTGCGCTTCG GCTGGGCGGC CGCGCGCTTC
GACGATGCGC TCAACTACGT GCCCGCCCGC CTGACGGCGC TCAGCTACGC GCTGCTCGGC
GACACACGCA CTGCGCTGCA ATGCTGGCGC GACCAGGCGC CGCGCTGGGA CAGCCCGAAT
GCGGGGCCCG TGATGGCATC CGGCGCGGGC AGCCTCAACG TGCTGCTCGG CGGCGCGGCC
GTCTATCACG GCGTGATAGA ACAGCGTCCG ATGCTCGGCG CAGGCCACAC GGCGGGTGCA
CGGCATGTCG AGGCGGCATT GATGCTGGTC GAGCGCAGCG TGATCCTGTG GCTCGCCGCG
TTCATCGTGC TTGCGCTGCT GAGCGTGCCG TTCCAGAGCT GA
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| Protein sequence | MMLLSLPFVA TLATAAVAVD RWLGEPERGH PLVAFGKLAA KIEVALNTGR RGRLLGIVAW
LLAVAPPVLA ATWLVLVLPF MWACAVHVAL LYFALGARSL HDHLEPIGRA LAKRDLAQAR
ILTARIVSRE TSHADESALS RAAVESALEN GNDAIFGALF WFAIFGGPGA LAFRLANTLD
AMWGYRTPRY LRFGWAAARF DDALNYVPAR LTALSYALLG DTRTALQCWR DQAPRWDSPN
AGPVMASGAG SLNVLLGGAA VYHGVIEQRP MLGAGHTAGA RHVEAALMLV ERSVILWLAA
FIVLALLSVP FQS
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