| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2111 |
|---|
| Symbol | |
|---|
| ID | 6243599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2368911 |
|---|
| End bp | 2369603 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642593904 |
|---|
| Product | chorismate lyase |
|---|
| Protein accession | YP_001858335 |
|---|
| Protein GI | 186476865 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.184267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATCC GTTTCGATGC TGCCGACGCG CACTGGCGCG TCGCGCCCCT TCCAGGTTTC
TCGCCCGATC AGAAAGACTG GCTCACGCGC GGCGGTTCGC TGACGGCGCA TTTGCGTACG
CTCGGCGCCG TCGCGGTGCG CGTGACGCGT GAGGCCGTCG ACTTGCCGTT CAACGACGAA
TATGCCGCGC TCGGCAGCGC GCCGCGCACG CCCGTGTGGG TGCGCGAAGT GGTGTTGTCG
GTGGGCGGCA GGCCGTACGT CGCCGCGCAC AGCATCGTGC CGCTCGCGGC AAGCACGGGC
GTCTGGCAGG CGATGCGGCG CTTGCGCACG CGGCCGCTCG CCGAACTGCT GTACAGCGAT
AGCAGCGTGT CGCGCTCGTC GCTAGTGAGC CGTCGCGTAA CGGCGCGGCA TCCGTTGTAC
GGGATCGCTT CGCGCGACAT GGAGGATGCG CAGCCCCACG CACTGTTCGC GCGACGCTCG
GTGTTCGAGC GCTACGGCGA GCCGTTGATG GTGACGGAAG TCATGCTGCC CGCGTTGTGG
ACCCATCTCG CGACGCGCCA TGACGAGCGT GAGCGTGTCC AGCATCCGTT GCCGCGCGAT
CATGGTCAGG CACTCGGTCA CACGGCATCG CGCGCCGATG TCAACGCGCG GCGCGACGCG
AAGGGCACCG GCAAACAAGG AGACGCACGC TGA
|
|---|
| Protein sequence | MPIRFDAADA HWRVAPLPGF SPDQKDWLTR GGSLTAHLRT LGAVAVRVTR EAVDLPFNDE
YAALGSAPRT PVWVREVVLS VGGRPYVAAH SIVPLAASTG VWQAMRRLRT RPLAELLYSD
SSVSRSSLVS RRVTARHPLY GIASRDMEDA QPHALFARRS VFERYGEPLM VTEVMLPALW
THLATRHDER ERVQHPLPRD HGQALGHTAS RADVNARRDA KGTGKQGDAR
|
|---|
| |