| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2079 |
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| Symbol | dnaE |
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| ID | 6243567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2329883 |
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| End bp | 2333446 |
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| Gene Length | 3564 bp |
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| Protein Length | 1187 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642593872 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001858303 |
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| Protein GI | 186476833 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0447418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCA TGTCAGATCC CCGCTTCGTC CATCTCCGCG TTCACTCCGA ATTCTCGATT
GCCGATGGCA TTGTGCGCAT CGACGACGTC GTCGATGCCG CTGCCAAAGA CGGTCAGGGC
GCGCTCGCGC TCACCGATCT CGGTAACGCA TTCGGTCTCG TCCGTTTTTA CAAGGAAGCC
CGTGGCAAAG GGGTCAAACC CATTGCCGGC TGCGATGTCT GGATCACGAA TCCGGATGAC
CGCGACAAGC CTTCGCGGCT TCTGTTGCTG GTCAGGAACA AGACCGGCTA TCTGAATCTT
TGCGAACTGC TGTCGAAGGC GTGGCTTACC AACCAGTATC GCGGGCGCGC GGAAGTGGAA
ACGGCGTGGC TCGAAAGCGG CCTCGCCGAA GGACTGCTGG CGCTGTCGGG CGCGCAGCAC
GGCGACGTGG GCCTCGCGCT CGCGGCGGGC AACCAGGAAG CCGCGCAGCG CAATGCGCAG
CGCTGGGCGC AGATCTTCCC GAACGGTTTT TACATTGAAT TGCAGCGCGG CGGACAAGCC
GGTGCGGAAG CGTATGTGCA GCAGGCCGTC GCGCTGGCGG CGTCGCTGAA GCTGCCCGTC
GTCGCGACGC ACCCGCTGCA GTTCATGACG CCCGACGACT TCACCGCGCA CGAAGCGCGC
GTGTGTATTT CCGAGGGCGA TATTCTCGCG AATCCGCGCC GTCAGAAGCG CTTTACGACG
GACCAGTATT TCCGCACGCA GGACGAGATG ATCGCGCTGT ACGCGGACAT CCCGTCCGCG
ATCGCGAACA CCGTCGAAAT CGCGAAACGC TGCAATCTCA CGCTCGAACT CGGCAAGCCG
AAGCTGCCGT TGTTCCCGAC GCCGGACGGC ATGTCGCTCG ACGACTACCT GGTCCAGCTG
TCGAAGGAAG GGCTTGAGAA GCGCCTGGAA CAACTGTTTC CTGAACAGGC CGAGCGCGAT
GCGCAACGCG AAGGCTATTA CGCGCGGCTC GACTTCGAAT GCGGCACGAT CATCAAGATG
GGCTTTCCCG GCTACTTCCT GATCGTGGCG GACTTCATCA ACTGGGCCAA GAACAACGGC
GTCCCCGTCG GGCCAGGCCG CGGCTCGGGC GCGGGTTCGC TGGTCGCGTA CGCGCTCGGC
ATTACCGACC TCGATCCGCT GCGCTATAAC CTGCTGTTCG AGCGTTTTTT GAATCCGGAG
CGCGTGTCGA TGCCCGACTT CGACATCGAC TTCTGTCAGC ACGGCCGCGA CCGCGTGATC
CAGTACGTGA AGGAGAAGTA CGGCGCGGAC GCCGTCTCGC AGATCGCGAC GTTCGGCACC
ATGGCAGCGA AAGCCGCGGT GCGCGACATC GGCCGCGTGC TCGATCTCGG CTATATGTTC
ACGGACGGCG TCGCCAAGCT GATTCCGTTC AAGCCGGGCA AGCACGTCAC GATCGCGGAC
GCGATGAAGG AAGAGCCGCT TCTGAAGGAG CGCTTCGACA ATGAAGACGA AGTGCACCAG
CTGCTCGAAC TCGCGCAGCG CGTGGAAGGC CTCACGCGTA ACGTCGGCAT GCACGCGGGC
GGCGTGCTGA TCGCGCCCGG CAAGCTGACG GACTTCTGCC CGCTCTATAC GCAGGGCGAC
GAAAGCGGCG TGGTGAGCCA GTACGACAAG GACGACGTGG AAGCCGTCGG CCTCGTGAAG
TTCGACTTTC TGGGTCTGAC CACGCTGACC ATTCTCGACT GGGCCGAGCG CTATATCCGC
CGTCTCGATC CATCGAAGGA AAACTGGTCG CTCGCACAGG TGCCGCTCGA CGACCCGGCG
GCGTTCTCGA TCCTCAAGAA AGCGAATACG GTTGCCGTGT TCCAGCTGGA AAGCCGCGGC
ATGCAGGGCA TGCTGAAGGA CGCGCAACCC GACCGCTTCG AGGACATCAT CGCGCTCGTG
GCCTTGTACC GGCCCGGCCC AATGGATCTG ATCCCGAGCT TCTGCGCGCG TAAGCACGGC
CGCGAGACAG TCGAATATCC GGATCCGCGT GTCGAACCTG TCCTGAAAGA GACCTACGGC
ATCATGGTCT ATCAGGAGCA GGTGATGCAG ATGGCGCAGA TCATCGGCGG CTATTCGCTG
GGGGGCGCCG ACCTGCTGCG TCGTGCGATG GGTAAGAAAA AGCCGGAGGA AATGGCGAAG
CATCGCGAGA TCTTCGCCGA GGGTGCCGCC AGGAACGGCT TGACGCGCGA GAAGGCCGAC
GAAACCTTCG ACCTGATGGA GAAGTTCGCG GGCTACGGCT TCAACAAGTC GCACGCGGCT
GCTTACGCGC TGCTCGCGTA TCACACCGCG TGGCTCAAGG CGCATCATCC CGCCGAATTC
ATGGCGGCCA ACATGTCGCT CGCGATGGAC GACACGGACA AGGTGAAGAT CCTGTTCGAA
GACTGCCTCG CGAACAAGAT GGCCGTGCTG CCGCCCGACA TCAATCTGTC CGCCTACCGG
TTCGAGCCGG TAGCGGAAGC GGACGGCAAG CGTTCGCGCA CGATCCGCTA CGGCCTTGGC
GCAATCAAGG GTAGCGGCCA GAACGCGATC GAAGAAATTC TGCGCGCGCG CGAAGAAGGC
CCGTTCGTCG ATATCTTCGA CTTCTGCAAC CGGATCGATC GGCGCGTCGT CAATCGCCGC
ACGATCGAAG CGCTGATCCG TGCCGGCGCA TTCGACTCCC TGCACGAGAA CCGCGCGCAG
CTGATCGCAT CCGTGTCGCT TGCGATGGAA GCCGCCGACC AGGCGAGCGC CAACGCGATG
CAGGCGGGTC TGTTCGACAT TGGCGATGCG CCTTCGCAGG GCCACGAACT CGTTGACGAA
CCCGCGTGGC CGGACAAGCG TCGTCTGCAG GAAGAGAAGA CGGCGCTCGG CTTCTATCTG
TCGGGGCATC TGTTCGACGC GTACAAGGAC GAAGTGCGAC GCTTCGTGCG CCAGAAGATC
GGCGAGCTCA AGGAAGGGCG CGACAAGCTG GTGGCGGGCG TGATCGTGTC GCTGCGCACG
CAGATGACCC AGCGCGGCAA GATGCTGATC GCGCTGCTCG ACGACGGCAC GGGCCAGTGC
GAAGTGACGG TATTCAATGA GCAATTCGAG GCGCACAAGC AGCTGTTCAA GGAAGACGAA
TTGCTCGTCG TGCAGGGGCA GGCGCGCAAC GATGCGTTCA CGGGCGGCAT CCGCTTTACC
GTCGACACGC CGATGGACCT CGGCCGCGCT CGCACGCGGT TCGCGCAAGC GGTGAAGGTG
CAGATGAACG GCAACGCGAA TGCACACACA TTGCGCTCGG TGCTCGAGGC CTATCGCGCG
AAGCCGGAAG ACGCTGAAGT CGCTGCGCCG GCTCCCCGCA GCGGTGCCCG CGGCGGTTTC
GGCGGCAATG GAGAATCAGG CGGGCGTGCA CAACGGCCGT CGGCGCCGAT CCCGAACGGG
CTTGCCGTGC AGATCGTCTA CCGCAGCGAC AACGCGGAGG GCGAAGTGAG GCTTGGCGAC
GCATGGCGCG TGAAGCCGAC GGACGAACTG CTCGCCGCAT TGCGCCGCGA GTTTTCGGGC
AGCGCGATCG AAATCGTGTA TTGA
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| Protein sequence | MSPMSDPRFV HLRVHSEFSI ADGIVRIDDV VDAAAKDGQG ALALTDLGNA FGLVRFYKEA
RGKGVKPIAG CDVWITNPDD RDKPSRLLLL VRNKTGYLNL CELLSKAWLT NQYRGRAEVE
TAWLESGLAE GLLALSGAQH GDVGLALAAG NQEAAQRNAQ RWAQIFPNGF YIELQRGGQA
GAEAYVQQAV ALAASLKLPV VATHPLQFMT PDDFTAHEAR VCISEGDILA NPRRQKRFTT
DQYFRTQDEM IALYADIPSA IANTVEIAKR CNLTLELGKP KLPLFPTPDG MSLDDYLVQL
SKEGLEKRLE QLFPEQAERD AQREGYYARL DFECGTIIKM GFPGYFLIVA DFINWAKNNG
VPVGPGRGSG AGSLVAYALG ITDLDPLRYN LLFERFLNPE RVSMPDFDID FCQHGRDRVI
QYVKEKYGAD AVSQIATFGT MAAKAAVRDI GRVLDLGYMF TDGVAKLIPF KPGKHVTIAD
AMKEEPLLKE RFDNEDEVHQ LLELAQRVEG LTRNVGMHAG GVLIAPGKLT DFCPLYTQGD
ESGVVSQYDK DDVEAVGLVK FDFLGLTTLT ILDWAERYIR RLDPSKENWS LAQVPLDDPA
AFSILKKANT VAVFQLESRG MQGMLKDAQP DRFEDIIALV ALYRPGPMDL IPSFCARKHG
RETVEYPDPR VEPVLKETYG IMVYQEQVMQ MAQIIGGYSL GGADLLRRAM GKKKPEEMAK
HREIFAEGAA RNGLTREKAD ETFDLMEKFA GYGFNKSHAA AYALLAYHTA WLKAHHPAEF
MAANMSLAMD DTDKVKILFE DCLANKMAVL PPDINLSAYR FEPVAEADGK RSRTIRYGLG
AIKGSGQNAI EEILRAREEG PFVDIFDFCN RIDRRVVNRR TIEALIRAGA FDSLHENRAQ
LIASVSLAME AADQASANAM QAGLFDIGDA PSQGHELVDE PAWPDKRRLQ EEKTALGFYL
SGHLFDAYKD EVRRFVRQKI GELKEGRDKL VAGVIVSLRT QMTQRGKMLI ALLDDGTGQC
EVTVFNEQFE AHKQLFKEDE LLVVQGQARN DAFTGGIRFT VDTPMDLGRA RTRFAQAVKV
QMNGNANAHT LRSVLEAYRA KPEDAEVAAP APRSGARGGF GGNGESGGRA QRPSAPIPNG
LAVQIVYRSD NAEGEVRLGD AWRVKPTDEL LAALRREFSG SAIEIVY
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