Gene Bphy_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2032 
Symbol 
ID6243521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2282987 
End bp2283733 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID642593826 
Productglucose-1-dehydrogenase 
Protein accessionYP_001858257 
Protein GI186476787 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.569693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.784384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAG TGGTTCTGAT CACGGGCGCG AGCCGCGGCA TCGGCCGCGC GACGGCGCGC 
CTGCTCGGCG CGCGCGGCTG GTCCGTCGGC GTGAACTACG CGAGCAACGA AGCGGCCGCA
AAAGAAACGG CCGCCGAAGT CGGACGTGCG GGCGGGCACG CACGCCTGAT CGCGGGCGAC
GTCGCCGACG AAGCGCAGGT CGTCGCGATG TTCGACGCGC TGGAACAGGC CTATGGGCGC
ATCGACGCGC TCGTGAACAA CGCCGGCATC GTCGCGCCTT CGATGCCGCT CGCCGACATG
GACGCGGCGC GTCTGAAGCG CATGTTCGAC GTCAACGTGT ACGGCGCGTA CCTTTGCGCA
CGCGAAGCGG CCCGGCGCAT GTCGAAAGAC CGCGGCGGGC ATGGCGGCGC GATCGTGAAC
GTGTCGTCGG CGGCGTCGCG GCTCGGCTCG CCCAACGAGT ACGTCGATTA CGCCGGCTCG
AAAGGCGCCG TCGACACGAT GACCATCGGT CTCGCGAAGG AACTCGGGCC GCAAGGCATT
CGGGTGAACG CCGTTCGCCC CGGACTGATC GACACCGACA TCCACGCGAG CGGCGGCCGT
CCCGACCGCG CCGCGGTGCT CGGCGCGCAG ACGCCGCTCG GCCGTCCCGG AACGGCCGAC
GAAGTCGCCG AAGCCATCGT CTGGTTGTTG GGCGACGCGT CGTCGTATGT GAACGGCGCA
CTGCTCGACG TCAGCGCCGG CCGCTGA
 
Protein sequence
MTKVVLITGA SRGIGRATAR LLGARGWSVG VNYASNEAAA KETAAEVGRA GGHARLIAGD 
VADEAQVVAM FDALEQAYGR IDALVNNAGI VAPSMPLADM DAARLKRMFD VNVYGAYLCA
REAARRMSKD RGGHGGAIVN VSSAASRLGS PNEYVDYAGS KGAVDTMTIG LAKELGPQGI
RVNAVRPGLI DTDIHASGGR PDRAAVLGAQ TPLGRPGTAD EVAEAIVWLL GDASSYVNGA
LLDVSAGR