Gene Bphy_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1782 
Symbol 
ID6243273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2036627 
End bp2037670 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content61% 
IMG OID642593572 
Productsuccinylglutamate desuccinylase 
Protein accessionYP_001858010 
Protein GI186476540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID[TIGR03242] succinylglutamate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.327695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA GCGCTGATCC ATCGATGCTC GATGACTTCC TCGCGTTCAC GCTTGCCGGT 
CATCGGCCTG CCGACGATGC GCGCGAGGGC GTGGGTGTGA ATGGCGTACG CTGGACGTGG
ATCGACGATG GCGTGCTGCA GTTCGAGCCC GCCACACCGG CGCGGCGCGA CGTGCGCAGC
GTGCTTGCAT CGGCAGGCAT TCATGGCGAC GAGACGGCGC CCATCGAACT GCTGTCGTTT
CTCGTGCGCG ATATCGCCAA TGGGCGTGCA GCACTCGCTT GCCGATTGCT GGTGATACTC
GGCAATGTGC AGGCGATGCG CGAGTCGTGC CGCTATATCG ACGACGATCT GAACCGGCTG
TTCAGCGGGC GGCATGTGGC ATTGCCTGCG AGTCGCGAGA CGCCGCGTGC GCAGGCGCTC
GAAGGTATCG CGTTGCGGTT CTTTGCTGGC GCATCGGATG CGCCGGGCGC GCGTTGGCAT
GTCGACATGC ACACGGCGAT TCGCGCTTCC GTATTCGAGC AGTTCGCGTT GTTGCCGCAT
ACGGGGGCAC CCTTGTCGCG TGCGATGTTC GAGTGGTTGC GGGACGCGCG GATTGCGGCG
GTGTTGTTGC ACACGACGAA GGGCAATACG TATTCACATT TCACTGCGTC TGAGTGTGGT
GCTCAAGCGT GCACGCTTGA ACTTGGAAAG GTGCGGCCGT TTGGTCAGAA CGATCTGGTT
CGTTTTGCTT TTGCCGATGG CGCGTTACGC CAGATGATCG CGGGCGAGCA GGGTGAGGGT
TCATTGGCTT TGCCGCGGGT GTTTACCGTG ATCGATCAGA TCACCAAGCG GAGCGATTCA
TTCGAGTTGC TGCTTGCTGA CGATGTCGCC AATTTCACGG CTTTTGAGCG CGATACGGTT
CTCGCGCGGG ATGGCGAGTA TCGGTATGTC GTGCGACATG ACGAAGAGCG CATCGTCTTT
CCTAATGCTG GCGTCAAGCC CGGGCTCCGG GCAGCGTTGC TGGTGGTTGA GACTACCGGC
GAGATTCACG CTGGTTTGAA GTAG
 
Protein sequence
MTSSADPSML DDFLAFTLAG HRPADDAREG VGVNGVRWTW IDDGVLQFEP ATPARRDVRS 
VLASAGIHGD ETAPIELLSF LVRDIANGRA ALACRLLVIL GNVQAMRESC RYIDDDLNRL
FSGRHVALPA SRETPRAQAL EGIALRFFAG ASDAPGARWH VDMHTAIRAS VFEQFALLPH
TGAPLSRAMF EWLRDARIAA VLLHTTKGNT YSHFTASECG AQACTLELGK VRPFGQNDLV
RFAFADGALR QMIAGEQGEG SLALPRVFTV IDQITKRSDS FELLLADDVA NFTAFERDTV
LARDGEYRYV VRHDEERIVF PNAGVKPGLR AALLVVETTG EIHAGLK