Gene Bphy_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1560 
Symbol 
ID6243051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1769091 
End bp1769444 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content60% 
IMG OID642593346 
Productendoribonuclease L-PSP 
Protein accessionYP_001857788 
Protein GI186476318 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA TTCGTCATCA CGTCGGCAAG CGCCTTTCGG AAACCGCCGT TCACAACGGT 
ACGGTGTATC TGGCTGGCCA GATCGCCGAA GACACCGACC AGGACATCGT CGGTCAAACG
CGCGAAGTGC TCGGCCACAT CGACCGGCTG CTCGGTGAAG TCAATAGCGA CAAGGCGCAT
TTGCTGTCGG TGCAGATTTA TATCTCGGAC ATGGTGCACT TTGCCGGCAT GAACGCCGTG
TGGGATGAAT GGGTCGCACA AGGCAACACG CCGCCGCGCG CAACCGTCGA AGCGAAGCTC
GCCAATCCCA AGTGCCTCGT CGAAGTGGTG GTCGTCGCCG CCCAGCGCAG CTAA
 
Protein sequence
MAVIRHHVGK RLSETAVHNG TVYLAGQIAE DTDQDIVGQT REVLGHIDRL LGEVNSDKAH 
LLSVQIYISD MVHFAGMNAV WDEWVAQGNT PPRATVEAKL ANPKCLVEVV VVAAQRS