| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1410 |
|---|
| Symbol | hisZ |
|---|
| ID | 6242901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1589227 |
|---|
| End bp | 1590378 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642593193 |
|---|
| Product | ATP phosphoribosyltransferase regulatory subunit |
|---|
| Protein accession | YP_001857638 |
|---|
| Protein GI | 186476168 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.526629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00000255449 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCT GGTTACTTCC CGAGAATATT GCCGACGTGT TGCCGTCGGA GGCACGCAAG
ATCGAAGAAT TGCGCCGCCG GCTGCTGGAC CGGTTTCGCG CCTATGGCTA CGAAATGGTC
ATGCCGCCGC TGCTCGAATA CCTCGAGTCG CTACTGACGG GCGGCGGCCG CGACCTGAAC
CTGCGCACCT TCAAGCTCGT CGACCAGCTG TCGGGCCGCA CGCTCGGGCT GCGCGCCGAC
ATCACGCCGC AGGTTGCGCG CATCGACGCG CACCTGCTGA ACCGTCAGGG CGTGACGCGT
CTGTGCTACG CGGGCAACGT GCTGCACACG CGTCCGCGCG GCCTACATGC GACGCGCGAG
CAGATCCAGA TCGGTGCCGA AATCTACGGT CATGCGGGTC TCGAAGCCGA CCTGGAAATT
CAGCAACTGA TGCTCGACGC GCTGCATCTC GCGGGCCTCG GCCGTGTGCG TCTGGACCTG
TGCCATGCCG CCGTGCTGGG TGCGCTGGTC GACAGCGAGC CCGCTGCTGC CGAACTCGGC
GAGTCGCTGT ATGAAACGCT CGCGGGCAAG GATGTGCCGC TCTTGACCGA ACTGACGGCA
AACCTCCCGC CCGTCACGCG CGATGCTCTG CGTGCGCTGC CCACGCTGTA CGGCGACGCG
ACGGTGCTCG AAGAGGCGCG CGCGCGCTTG CCGAACGCGC CGGAAATCTC ACGCGCGCTC
GACGATCTCG CGTTTCTCGC GCAGCAGGTC GGCGGCGCGG AAGTGATGAT CGATCTGGCC
GATCTGCGCG GCTACGCGTA TCACAGCGGT GTGATGTTCT CGGCATATGT CGACGGCGTG
CCGAATGCAG TCGCGCGCGG CGGTCGTTAC GACAAGGTCG GCCAGGCGTA CGGGCGCGCT
CGTGCTGCGA CGGGCTTTTC GCTGGATCTG CGCGAAGTCG CGCGCATTTC GCCCATCGAG
GCGCGCAGCA GTGCGATCCT CGCACCGTGG CAAGCGGGCG AAGCGTTGCG TACGAGCGTT
GCAGCGTTGC GCGATGCCGG CGAAGTCGTG ATCCAGGCGC TGCCGGGTCA CGATCACGCG
CTCGACGAAT TCGCGTGCGA CCGCGTGCTG GTCGAGCGCG ACGGCCAGTG GGTGGTCGAG
TTGAAGTCCT AG
|
|---|
| Protein sequence | MSTWLLPENI ADVLPSEARK IEELRRRLLD RFRAYGYEMV MPPLLEYLES LLTGGGRDLN
LRTFKLVDQL SGRTLGLRAD ITPQVARIDA HLLNRQGVTR LCYAGNVLHT RPRGLHATRE
QIQIGAEIYG HAGLEADLEI QQLMLDALHL AGLGRVRLDL CHAAVLGALV DSEPAAAELG
ESLYETLAGK DVPLLTELTA NLPPVTRDAL RALPTLYGDA TVLEEARARL PNAPEISRAL
DDLAFLAQQV GGAEVMIDLA DLRGYAYHSG VMFSAYVDGV PNAVARGGRY DKVGQAYGRA
RAATGFSLDL REVARISPIE ARSSAILAPW QAGEALRTSV AALRDAGEVV IQALPGHDHA
LDEFACDRVL VERDGQWVVE LKS
|
|---|
| |