Gene Bphy_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1308 
Symbol 
ID6242799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1465635 
End bp1466288 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID642593085 
Product17 kDa surface antigen 
Protein accessionYP_001857536 
Protein GI186476066 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACA CCCGTTTTGT TCGCCCTCTC GTTCGTACGA CATTGCTCGC GCTCTGCGTC 
ACGCTGCCGC TCGCGGGCTG CGTCGTTCCC GGCAATTCGC CTTATGGCTC GCAGTACGGC
TCGACCTACG GTTCGAGCTA CGCCACGCAG CCCGTGTACG CACAGCCGGC GCAACCGGCC
TACGCGCAAC CCGGCTATGT GCAGCAGCCG TACGCACAAC AGCCGCAATA TCAACACGGG
TACGATCAGT CCGACTGGCA GAACAACCAG ACGTACCAGC AGCAACCCCA ACAGGGCTAC
GGTTATGGGG AACAATACGG CGTGGTCTCG TCGATCCAGC CGTTGGGGAA TCCCGGTGCC
GTGACGGCGG GTGGCGTAGC GGGCACGGTG ATCGGCGCAG TCGTGGGCGG CGTGATCGGC
AACCAGTTCG GACGGGGCCA CGGACGCGAC GCAGCGACGG CAATCGGGGT GCTGGGCGGC
GCCGTCGCAG GCAATCAGTT GGGTCAGCAG GCGGGTGCGT CGTCGCCGGG CGGCTACCGG
ATTGCGGTCC AGCTGAACGA CGGCTCCACG CGTGCGTTCG ATGTCGGCTC GCCGGGCGAC
CTGCATCCTG GCGATCGCGT GCGCATTGCG GGCAACCGCC TCGACCGCTA CTAG
 
Protein sequence
MTHTRFVRPL VRTTLLALCV TLPLAGCVVP GNSPYGSQYG STYGSSYATQ PVYAQPAQPA 
YAQPGYVQQP YAQQPQYQHG YDQSDWQNNQ TYQQQPQQGY GYGEQYGVVS SIQPLGNPGA
VTAGGVAGTV IGAVVGGVIG NQFGRGHGRD AATAIGVLGG AVAGNQLGQQ AGASSPGGYR
IAVQLNDGST RAFDVGSPGD LHPGDRVRIA GNRLDRY