| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1268 |
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| Symbol | |
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| ID | 6242760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1421150 |
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| End bp | 1423510 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642593046 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001857497 |
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| Protein GI | 186476027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00608444 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.905221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTCG CTGGCCTGTT CGCCACGCTC GCCGTGGTGG GGGCGCTGAT CGTCGGCTAC
GCGCTCGTCG TGATGGGCCC GCAGTTGCCG TCGCTCGACG CGCTGACCGA CTATCGCCCG
AAGGTCCCGC TGCGCATCTA CACGGCCGAC CACGTGCTGA TCGGCGAGTT CGGCGAAGAG
CGGCGCAGCC TCGTGCGCTT TCAGGACATC CCCGACGTGC AGAAGAAGGC TGTGCTCGCG
ATCGAGGACT ACCGTTTCTA CGAGCACGGC GGCGTCGATT TCATCGGCAT TCTGCGCGCG
GGTTTCGCGG ACATCATGCA CGGCGGCTCG TCGCAGGGCG CAAGCACGAT CACGATGCAG
GTCGCGCGTA ATTTCTTTCT GTCGAGTGAA AAGACGTACA CCCGCAAGGT CTATGAAATG
CTGCTCGCGT ACAAGATCGA GCGCGCGCTC ACCAAAGACC AGATTCTGGA GCTGTACATG
AACCAGATCT ATCTGGGCGA ACGCGCTTAC GGCTTCGCGG CGGCGGCACG TGTGTACTTC
GGCAAGGATC TGAAAGACAT CACGCTCGCC GAAGCGGCGA TGCTCGCGGG GCTGCCGAAG
GCGCCGTCCG CGTACAACCC GGTCGTCAAT CCGAAGCGCG CGAAGATCCG ACAGGAATAC
ATCCTCAAGC GCATGCTGGA CCTGAATTAC ATTACGCAGG ACCAGTACAA CCAGGCCGTG
AAGGAAGAGA TTCGCACGAA GACGGCGGGC AACGAGTACA GCGTGCACGC CGAGTACATC
GCGGAAATGG TGCGTCAGAT GATGTACGCG CAGTACAAGG ACGAGACGTA CACGCGTGGC
CTCAACGTGA CGACGACGAT CGATTCGGCC GATCAGGAAG CCGCATATCG CGCGGTGCGC
AAAGGCGTGA TGGACTACGA GCGCCGCCAC GGCTATCGCG GACCGGAAGG CTTCGTCGAA
TTGCCGGCTG CTGGCGACGA GCGCGACGAG GCGATCGAGG ACGCGCTGAA CGATCATCCC
GACAACGGCG AGATCGTGGC GGCCGTCGTC ACGTCGGCGA CCGCGAAGGA AGTGAAGGCT
CAAATGCTCG ACGGCACGCA GGCAAGCGTG ACGGGCGACG GCCTGCGCTT TGCAGCCGGT
TCGCTGTCGG CGCGCGCCGC GCAGGCGCAG AAGATCCGGC CTGGCTCGAT CGTGCGGCTG
GTGGCCGATG CGAACGGCAA ATGGCAGATC ACGCAGTTGC CGCAGGTGGA GGGCGCGCTG
GTGTCGATGA CGCCGCAGGA CGGCGCGATT CGCTCGCTCG TCGGCGGCTT CGACTTCAAC
AAGAACAAGT TCAACCATGT GACGCAGGCA TGGCGTCAGC CGGGTTCGAG CTTTAAACCG
TTCATCTATT CGGCTGCGCT CGACAAGGGC CTTGGACCGG CGACGATCAT CAACGACGCG
CCGCTCTACT TCCCGCCGAG CGCGCCGGGC GGCGACGCGT GGGAGCCAAA GGACGACGAC
CAGCCCGACG GTCCGATGCC CATGCGTCTT GCGCTGCAGA AGTCGAAGAA CCTGGTGTCG
ATCCGCATCC TGTCCTATAT CGGCACGAAG TACGCGCAGG ACTTCGTCAC GCAGCGCTTC
GGTTTCGACG CCGACAAGAC GCCGCCATAC TTGCCGATGG CGCTCGGCGC GGGCCTCGTC
ACGCCGCTGC AGTCGGCGGG CGCGTATAGC GTGTTCGCGA ACGGCGGCTA CCGCATCAAT
CCGTATCTGA TCGCCGAAGT CGACGATCCG CATGGGCAGC CGCTGTCGCG CGCGCAGCCG
TTGACGGCGG GCCGCGACGC GCCGCGCACG CTCGAGCCGC GCAACGCGTA CATCATGAAC
AGCCTGCTGC ATTCGGTGGC GACGGCGGGT ACGGGCGCGG GCACCAACGT GCTGCATCGA
AGCGACCTGC AGGGCAAGAC GGGGACCACG AACGACGCGA AGGACGGCTG GTTCGCCGGC
TATCAGCAGT CGCTCGTGGC CGTCGCGTGG ATGGGTTACG ACCAGCCGAA GTCGCTTGGC
AGCCGTGAAT TCGGCGCGCA ACTGGCCCTC CCGATCTGGG TCGAGTACAT GCAGCGCGCG
CTGCGCGGCG TGCCGCAAGC CGAGCCGGAG ATGCCGCCGG GCGTGACGAC CGTCGATGGC
GAACTGTTCT ATGCGGACAT GACGCCGGGC GCCGGGTTCG TCGCGAGCAT CGGCATGGAT
TCGGCGAATC CGCTGGCGAG CGGCGGCGAT GCCGTCGGTA CGGTGGGGCC CGCAGGGATG
ACACCGCCCG CGCCGCCGCC GAACGTCACG TCGACGGAGA AGAAGCAGAT CATGGATCTG
TTCGAGTCGA ACAAGCCTTG A
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| Protein sequence | MWFAGLFATL AVVGALIVGY ALVVMGPQLP SLDALTDYRP KVPLRIYTAD HVLIGEFGEE
RRSLVRFQDI PDVQKKAVLA IEDYRFYEHG GVDFIGILRA GFADIMHGGS SQGASTITMQ
VARNFFLSSE KTYTRKVYEM LLAYKIERAL TKDQILELYM NQIYLGERAY GFAAAARVYF
GKDLKDITLA EAAMLAGLPK APSAYNPVVN PKRAKIRQEY ILKRMLDLNY ITQDQYNQAV
KEEIRTKTAG NEYSVHAEYI AEMVRQMMYA QYKDETYTRG LNVTTTIDSA DQEAAYRAVR
KGVMDYERRH GYRGPEGFVE LPAAGDERDE AIEDALNDHP DNGEIVAAVV TSATAKEVKA
QMLDGTQASV TGDGLRFAAG SLSARAAQAQ KIRPGSIVRL VADANGKWQI TQLPQVEGAL
VSMTPQDGAI RSLVGGFDFN KNKFNHVTQA WRQPGSSFKP FIYSAALDKG LGPATIINDA
PLYFPPSAPG GDAWEPKDDD QPDGPMPMRL ALQKSKNLVS IRILSYIGTK YAQDFVTQRF
GFDADKTPPY LPMALGAGLV TPLQSAGAYS VFANGGYRIN PYLIAEVDDP HGQPLSRAQP
LTAGRDAPRT LEPRNAYIMN SLLHSVATAG TGAGTNVLHR SDLQGKTGTT NDAKDGWFAG
YQQSLVAVAW MGYDQPKSLG SREFGAQLAL PIWVEYMQRA LRGVPQAEPE MPPGVTTVDG
ELFYADMTPG AGFVASIGMD SANPLASGGD AVGTVGPAGM TPPAPPPNVT STEKKQIMDL
FESNKP
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