Gene Bphy_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1005 
Symbol 
ID6242503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1126329 
End bp1127495 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID642592781 
Producthypothetical protein 
Protein accessionYP_001857240 
Protein GI186475770 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.354968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.893923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGAC GCGACTTCAT ATCGATGGCA GCGGCGGCAG GTGCCTCCTT GTCGGTGTCG 
CGCGTATTCG CGACGCCACA GACCGGTGGC GGCATATTGC CGCAACTGCA TGCACGCAAA
ACCGCTCGCG ACGCGTTCGG CAAGCTGTTG ATCCTGATCG AACTCAAGGG CGGCAACGAC
GGACTGAACA CCGTCATTCC TTTTACCGAT TCCAGGTACT ACGCGCTGCG CACGCACATC
GCGATACCGC GCAATCGTGG GCTTGCGATA GATGGTCGAA CCGCGCTGCA TCCGGCGATG
CGTGAACTGC TTCCTTTGTG GCGCGATGGG CAACTGGCTG TCGTGCAGGG CGTCGGTTGC
GGGCGCGACG ATGCATCGCA TTTTCGTTCG ACGGAGATCT GGCATACGGC GTCGCGCGCC
GACGAATATC GGCGCGATGG CTGGCTGACG CGTGTCGCCG TGCAGTGCGG CGCTGTGAAC
GGGCGCTTCG CGGCGGCGTC GTTCGGCAGT GACGAGCCGG GGCCATTTGC GCAATTGGCG
CATCGCTGCG GGGACGAACA TTCGTGGTCA CGTGTCGACG ACCCCGACAC CTTGGCTCAC
GTCGGTCGGC CGGATGTGGG CGAGGGTGCG GGGGATCGCG TTCCGGGCAC GACGCTCGAT
GCAGCGCACG CCGGCGTGCG CTTGTTTCGC GATTCGATCG CGGCAGCGCT GCGCACGGTC
GATATGATGC AGCCGCATAT GCGCGGTGCG ATTCGCGTGA CGCTCGATGG CTTCGACACA
CATCGGAACC AGCTGACCCG GCATGCGGCA TTGCTCGCTC AACTGGCGGG AAGTTGTGCA
ACGCTTCGCG AGGAACTCGT GCGGCGCGGT CGTTGGCACG ACACGCTCGT GATGACGTAT
TCGGAATTTG GCCGGTCCGC ACGCGAGAAC GTTGATCGCG GCACTGAGCA TGGCGGCGCC
GCTGCACACT TCGTGATGGG GGGCGGCGTG CGCGGCGGCG TGTATGGGCA GCCGCCCGAT
CTGACGAGAC TCGATGCCGA TGGCAGGCTG CCCGTCGAAG TCGACTTCAG GCGGCTCTAC
GCGACGGCGC TCGCGTCATT CTGGAAGCTG GACGCGAACG CGGTGCTGCG CGACGCGGTG
CAGCCGCTCC CGCTCATGCG AGTGTGA
 
Protein sequence
MKRRDFISMA AAAGASLSVS RVFATPQTGG GILPQLHARK TARDAFGKLL ILIELKGGND 
GLNTVIPFTD SRYYALRTHI AIPRNRGLAI DGRTALHPAM RELLPLWRDG QLAVVQGVGC
GRDDASHFRS TEIWHTASRA DEYRRDGWLT RVAVQCGAVN GRFAAASFGS DEPGPFAQLA
HRCGDEHSWS RVDDPDTLAH VGRPDVGEGA GDRVPGTTLD AAHAGVRLFR DSIAAALRTV
DMMQPHMRGA IRVTLDGFDT HRNQLTRHAA LLAQLAGSCA TLREELVRRG RWHDTLVMTY
SEFGRSAREN VDRGTEHGGA AAHFVMGGGV RGGVYGQPPD LTRLDADGRL PVEVDFRRLY
ATALASFWKL DANAVLRDAV QPLPLMRV