| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0993 |
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| Symbol | mscL |
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| ID | 6242491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1112708 |
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| End bp | 1113157 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642592769 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_001857228 |
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| Protein GI | 186475758 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.125438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTAG TCACGGAATT CAAGGAATTT GCCCTTAAAG GCAACGTAAT GGACCTCGCG
GTCGGTGTGA TCATCGGCGG CGCGTTCTCG ACGATCGTCA ACTCCGTCGT CAAGGACCTG
ATCATGCCCG TCGTTGGCGT GGCGACGGGC GGCCTCGATT TCTCCAACAA GTTCATCCTG
CTCGGGCACA TACCCCCGAA CTTCAAGGGC AACCCCGATT CGTACAAAGA CCTGCAGACG
GCAGGCGTCG CCGCGTTCGG CTATGGCTCG TTCATCACGG TCGCGATCAA CTTCGTGATT
CTCGCGCTGA TCATCTTCAT GATGGTCAAG TTCATCAACA AGCTGCGCGC CCCGGCACCC
GCCGAAGCGG CCGCCCCGCC GCCCACGCCG GAAGACGTGC TGCTGCTGCG CGAAATTCGC
GATTCCCTGA AAAATTCGCC GCGCGTCTGA
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| Protein sequence | MSLVTEFKEF ALKGNVMDLA VGVIIGGAFS TIVNSVVKDL IMPVVGVATG GLDFSNKFIL
LGHIPPNFKG NPDSYKDLQT AGVAAFGYGS FITVAINFVI LALIIFMMVK FINKLRAPAP
AEAAAPPPTP EDVLLLREIR DSLKNSPRV
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