| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0899 |
|---|
| Symbol | |
|---|
| ID | 6242397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1003734 |
|---|
| End bp | 1004456 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642592674 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001857134 |
|---|
| Protein GI | 186475664 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.159864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACAA CAAAAATCAG ACAGCTCGTC TGCGGGGCGA TGGTCGCGGC ACTGGCCGCA
TGCGGCTCGG CTCCCGTGGG TCCGGGCTTC TATCGCGTCG AACGGGGCGA CACGCTGTAC
AAGGTCGCGC GCAGCAACCG GACGTCGGTG CAGAACATCG TGCGCTGGAA CAACCTGTCG
AATCCCGATT CGATCGAGGT CGGCCAGGTG CTGCGCGTCG CGCCGCCGCC CGGCACAGCG
ACGGCCAGCA CGGCTCCGGC GCGAAGCAGC AATGGCAGCG GCAGCGCGAG CGCAGCGGCG
GCAACGGCGT CCTCGTCGCG CGGCGCGGCC GCCGACACGC CTTCGGCGCC TCCGTCGTCG
ATCTCGTTGA TCTGGCCGGC AACGGGCAAT GTGGTCCGCA ACTTCGACGG CAATAATTCG
AAAGGCATCG ATATCGCGAA CGCCGCGGGC ACACCCGTGT TCGCCGCGGC GGGCGGCACC
GTCGTCTATG CAAGCAACGG CCTGCGCGGC TACGGCAATC TGCTGATCAT CAAGCACAAC
GCCGATTACC TGACGGCCTA CGCGCACAAC CGCACGCTGC TCGTGAAGGA AGGCGAGACC
GTGCAGCAAG GTCAGAAAAT CGCCGAGATG GGCGACTCGG ACAACGACCG CGTGATGCTG
CATTTCGAAC TGCGTTACGC GGGCCGCTCG ATCGATCCGG CGCGGTCTCT GCCGCCACGC
TGA
|
|---|
| Protein sequence | MLTTKIRQLV CGAMVAALAA CGSAPVGPGF YRVERGDTLY KVARSNRTSV QNIVRWNNLS
NPDSIEVGQV LRVAPPPGTA TASTAPARSS NGSGSASAAA ATASSSRGAA ADTPSAPPSS
ISLIWPATGN VVRNFDGNNS KGIDIANAAG TPVFAAAGGT VVYASNGLRG YGNLLIIKHN
ADYLTAYAHN RTLLVKEGET VQQGQKIAEM GDSDNDRVML HFELRYAGRS IDPARSLPPR
|
|---|
| |