Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0835 |
Symbol | |
ID | 6242333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 933548 |
End bp | 934201 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642592605 |
Product | anti sigma-E protein, RseA |
Protein accession | YP_001857070 |
Protein GI | 186475600 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAGCA TCATGGGGTC GGTTTCGGTG CCAATGCAAA CAAACGCGCA AGCAAGCTCG CATGCCGAGC TTCTGTCTGC TTTCGTCGAC GGTGAACTGT TCGACGGCGA GCATCCGAAC ACAATTCTGG CCGCGCTGGA TCAAAAAGAT CGCGCGGCAT GGTCGTGCTA TCACCTGATC GGCGACGCGC TGCGTTCCGA CGATCTGGCT GTCAGCCCGG CTACCAGCAG TGCCTTTCTG GCGGGGTTTT CGGCCCGCTT CGAAAACGAG GCGCATGTGC TCGCACCGGC TGCCATGCCG GCCGCACGCC GTCTGCTCGC CTTGCGCCGC CGAGTGATTC CCGCATTCGC CGTGGCGGCT GCGGCCGCGA CGCTGACGTG GATCGTGATG CCGCAGCTGT CGGGCATCGA CACGGGTGCG GGCGTGACGC AGGTCGCGTC GGTCGCGCCG CACGGGGACT CGGTGCAGCG CGTGGCAATG GCTTCGATGC CTGCCGCGAC CACGGCCCAG GCGGAAGTAT CAGACGGCAA CATCATCCGC GACGCAAGCC TCGACCAATA TCTGGAAGCG CATCAACAGT TCGGCCTGCA GCCTGTCGTA TCGGGTTCGA TGCCGTTGCT CCGCGCGGCT TCTCTGACCA CGCAGGGCCA CTAG
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Protein sequence | MGSIMGSVSV PMQTNAQASS HAELLSAFVD GELFDGEHPN TILAALDQKD RAAWSCYHLI GDALRSDDLA VSPATSSAFL AGFSARFENE AHVLAPAAMP AARRLLALRR RVIPAFAVAA AAATLTWIVM PQLSGIDTGA GVTQVASVAP HGDSVQRVAM ASMPAATTAQ AEVSDGNIIR DASLDQYLEA HQQFGLQPVV SGSMPLLRAA SLTTQGH
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