Gene Bphy_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0835 
Symbol 
ID6242333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp933548 
End bp934201 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID642592605 
Productanti sigma-E protein, RseA 
Protein accessionYP_001857070 
Protein GI186475600 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAGCA TCATGGGGTC GGTTTCGGTG CCAATGCAAA CAAACGCGCA AGCAAGCTCG 
CATGCCGAGC TTCTGTCTGC TTTCGTCGAC GGTGAACTGT TCGACGGCGA GCATCCGAAC
ACAATTCTGG CCGCGCTGGA TCAAAAAGAT CGCGCGGCAT GGTCGTGCTA TCACCTGATC
GGCGACGCGC TGCGTTCCGA CGATCTGGCT GTCAGCCCGG CTACCAGCAG TGCCTTTCTG
GCGGGGTTTT CGGCCCGCTT CGAAAACGAG GCGCATGTGC TCGCACCGGC TGCCATGCCG
GCCGCACGCC GTCTGCTCGC CTTGCGCCGC CGAGTGATTC CCGCATTCGC CGTGGCGGCT
GCGGCCGCGA CGCTGACGTG GATCGTGATG CCGCAGCTGT CGGGCATCGA CACGGGTGCG
GGCGTGACGC AGGTCGCGTC GGTCGCGCCG CACGGGGACT CGGTGCAGCG CGTGGCAATG
GCTTCGATGC CTGCCGCGAC CACGGCCCAG GCGGAAGTAT CAGACGGCAA CATCATCCGC
GACGCAAGCC TCGACCAATA TCTGGAAGCG CATCAACAGT TCGGCCTGCA GCCTGTCGTA
TCGGGTTCGA TGCCGTTGCT CCGCGCGGCT TCTCTGACCA CGCAGGGCCA CTAG
 
Protein sequence
MGSIMGSVSV PMQTNAQASS HAELLSAFVD GELFDGEHPN TILAALDQKD RAAWSCYHLI 
GDALRSDDLA VSPATSSAFL AGFSARFENE AHVLAPAAMP AARRLLALRR RVIPAFAVAA
AAATLTWIVM PQLSGIDTGA GVTQVASVAP HGDSVQRVAM ASMPAATTAQ AEVSDGNIIR
DASLDQYLEA HQQFGLQPVV SGSMPLLRAA SLTTQGH