| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0427 |
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| Symbol | |
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| ID | 6241929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 486890 |
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| End bp | 487510 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642592191 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001856666 |
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| Protein GI | 186475196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.378128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.622641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATGTCG GGGAACGTCT GAACAGCATC ACTCACCTCG TCGGCGCCGT GCTATCGGTC
GCGGGGCTGG CGACGCTTGT GACGATGGGC GCGCTCGACG GCGATGCGTA CAAGGTGGTG
AGCTTCAGCG TCTATGGCGC GATGCTGTGT GCGCTCTACG GCATCTCGAC GCTGTATCAC
AGCGTGCGTC GGCCGGGTCT TAAGGCGATC TTGCAGAAGT GTGATCACTC TGCAATTTAT
CTTCTGATCG CGGGCAGCTA TACGCCGTTT ACACTGGTCA CGCTGCGTGG CCCTTGGGGA
TGGTCGCTGT TCGGCGTGAG CTGGGGTCTC GCCGCGCTCG GGATCATGCA GGAACTCACG
CTCGGGCGGC GTACCCGCAG CGTATCGATG GTGCTGTATG TGCTGATGGG ATGGCTTGCG
CTCGTTGCCA TCCGCCCGCT GGTGACTGCG TTGCCGACCG CGGGCACCGC CTGGCTGCTG
GCAGGCGGAA TCATCTATAG CGCCGGCATC TACTTCTTCA TCAACGACGA GCGCATCCGG
CACGGACATG GCATCTGGCA CCTGTTCGTA CTCGCCGGCA GTCTGTGTCA GTTCGTCAGC
GTCGCGCGAT ATGTCGCATG A
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| Protein sequence | MHVGERLNSI THLVGAVLSV AGLATLVTMG ALDGDAYKVV SFSVYGAMLC ALYGISTLYH
SVRRPGLKAI LQKCDHSAIY LLIAGSYTPF TLVTLRGPWG WSLFGVSWGL AALGIMQELT
LGRRTRSVSM VLYVLMGWLA LVAIRPLVTA LPTAGTAWLL AGGIIYSAGI YFFINDERIR
HGHGIWHLFV LAGSLCQFVS VARYVA
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