Gene Bphy_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0399 
SymbolksgA 
ID6241901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp457051 
End bp457881 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID642592163 
Productdimethyladenosine transferase 
Protein accessionYP_001856638 
Protein GI186475168 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.136903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA GTTCAAGCAG ACAGCACCAG GGCCACTTCG CGCGCAAGCG CTTCGGACAG 
AATTTTCTGG TCGACCTGGG CATCATCGAT TCAATTGTCG ACGTGATCCG TCCACAGCGC
GGCGAGCGCA TGGTCGAAAT TGGACCGGGG CTCGGTGCGC TTACGGAACC GCTGGTCGAG
CGTCTCGCGA CGCCCGAAGC GCCGCTGCAT GCTGTCGAAC TCGACCGCGA CCTGATCGGG
CGTCTGAAGA AGAAATTCGG CAACCTGCTC GAACTGCACG AAGGCGACGC GCTCGCGTTC
GACTTCGGCT CGCTCGCGGG CGAGGGCGAC AAGCCGACGC TGCGTATCGT CGGCAATCTG
CCGTACAACA TTTCCAGCCC GCTGCTGTTT CATCTCGCCA CCTTCGCCGA GCGCGTGATC
GATCAGCATT TCATGTTACA GAACGAAGTG GTGGAGCGCA TGGTCGCAGA GCCGGGCAGC
AAGGCGTTCA GCCGGTTGTC AGTGATGCTG CAGTATCGCT ATGTGATCGA CAAGCTGCTC
GACGTGCCGC CCGAATCGTT CCAGCCGCCG CCGAAAGTCG ATTCCGCTAT CGTGCGCATG
ATCCCGTACG CGCCGCACGA ACTGCCCGCC GTCGACGAAA TCAAGCTCGG CGAAGTCGTG
ACGGCGGCGT TTTCGCAGCG TCGCAAGATG TTGCGCAATA CGTTGTCGAC GTATCGCGAT
TCCGTCGATT TCGAAGCGCT CGGCTTCGAT CTGCAACGCC GCGCCGAAGA CGTGCCCGTC
GCGGAATACG TGGCCGTTGC GCAGGCCGTG TCGGCGGCAG CGGGCACTTA G
 
Protein sequence
MSNSSSRQHQ GHFARKRFGQ NFLVDLGIID SIVDVIRPQR GERMVEIGPG LGALTEPLVE 
RLATPEAPLH AVELDRDLIG RLKKKFGNLL ELHEGDALAF DFGSLAGEGD KPTLRIVGNL
PYNISSPLLF HLATFAERVI DQHFMLQNEV VERMVAEPGS KAFSRLSVML QYRYVIDKLL
DVPPESFQPP PKVDSAIVRM IPYAPHELPA VDEIKLGEVV TAAFSQRRKM LRNTLSTYRD
SVDFEALGFD LQRRAEDVPV AEYVAVAQAV SAAAGT