| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0370 |
|---|
| Symbol | |
|---|
| ID | 6241872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 418075 |
|---|
| End bp | 419598 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642592134 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_001856609 |
|---|
| Protein GI | 186475139 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC ACGACTATCT GAAGAAAATC CTCAACGCCC GCGTCTACGA CGTCGCGCGT
GAGACCGAAC TCGAATATGC GCGGAATCTG TCCGCACGGC TGCGCAACCC CATTTACCTG
AAGCGCGAAG ACAATCAGCC CGTCTTCTCG TTCAAGCTGC GCGGCGCGTA CAACAAGATG
GCGCATATTC CCGCCGACGC GCTCGCGCGC GGCGTGATCA CGGCTTCGGC GGGTAACCAT
GCTCAGGGCG TCGCACTGTC GGCGGCACGT ATGGGCGTGA AGGCAACCAT CGTCGTCCCC
GTGACGACGC CGCAGGTAAA AGTGGACGCC GTGCGCGCGC ACGGCGGGCC GACCGTCGAG
GTCGTGCAGG CAGGCGAGTC GTACAGCGAT GCCTACGCAC ACGCCGTCAA GCTGCAGGAA
CAGCACGGCA TGACCTTCGT CCATCCGTTC GACGATCCAT ACGTGATCGC CGGCCAGGGC
ACCGTCGCGA TGGAAGTGCT GAGCCAGCAT CAGGCGCCCA TTCACGCGAT CTTCGTGCCC
ATCGGCGGCG GCGGTCTCGC GGCCGGCATT GCGGCGTACG TGAAATCGGT GCGTCCTGAG
ATCAAGGTGA TCGGCGTACA GACGGACGAC TCGTGCGCGA TGGCGCAATC GATCAAGGCC
GGCAAGCGCG TCACGCTCAA CGAAGTCGGC CTGTTTTCGG ACGGCACAGC CGTCAAGCTC
GTCGGCGAAG AGACATTCCG CCTGTGCCAG GCGTATCTCG ACGAGGTGCT GACGGTCAAC
ACCGACGCGC TGTGCGCCGC GATCAAGGAC GTCTTCCAGG ACACGCGCAG CGTGCTGGAG
CCGGCCGGGT CGCTGGCCGT CGCGGGCGCA AAGCAATATG CCGAGCGCGA AGGCATCGAA
AACCAGACGC TGATCGCGGT CACGTCGGGC GCAAACATGA ACTTCGACCG CATGCGCTTC
GTCGCCGAGC GCGCGGAAGT CGGTGAAGCG CGCGAGGCCG TGTTCGCCGT GACGATTCCC
GAAGAACGCG GCAGCTTCAA ACGCTTCTGC GAACTGGTCG GCACGCGCAG CGTCACCGAG
TTCAACTACC GCATTGCAGA TGCGAATTCC GCGCATATCT TTGTCGGCGT GCAGATCCGT
AACCGCGGCG AGTCCGCGCA GATCGCCGGC ACGTTCGAGG AGCACGGCTT TGCGACCGTC
GATCTGACGG GCGACGAGCT GTCGAAGCAG CATATCCGCT ACATGGTCGG CGGACGCTCG
CCGCTCGCGC ACGACGAGCG CCTGTTCCGC TTCGAGTTTC CGGAGCGGCC GGGCGCGCTG
ATGAAGTTCC TGTCGTCGAT GGCGCCGAAC TGGAACATCA GCCTTTTCCA TTACCGCAAC
CAGGGCGCGG ACTACAGCTC GATTCTCGTC GGCATTCAGG TGCCGTCGGC GGAAGATGCG
GAATTCGCGC GCTTCCTCGC GACACTCGGC TATCCGTATT GGGAAGAGAC GTCGAACCCG
GTGTATCGCC TGTTCCTCGC ATAA
|
|---|
| Protein sequence | MASHDYLKKI LNARVYDVAR ETELEYARNL SARLRNPIYL KREDNQPVFS FKLRGAYNKM
AHIPADALAR GVITASAGNH AQGVALSAAR MGVKATIVVP VTTPQVKVDA VRAHGGPTVE
VVQAGESYSD AYAHAVKLQE QHGMTFVHPF DDPYVIAGQG TVAMEVLSQH QAPIHAIFVP
IGGGGLAAGI AAYVKSVRPE IKVIGVQTDD SCAMAQSIKA GKRVTLNEVG LFSDGTAVKL
VGEETFRLCQ AYLDEVLTVN TDALCAAIKD VFQDTRSVLE PAGSLAVAGA KQYAEREGIE
NQTLIAVTSG ANMNFDRMRF VAERAEVGEA REAVFAVTIP EERGSFKRFC ELVGTRSVTE
FNYRIADANS AHIFVGVQIR NRGESAQIAG TFEEHGFATV DLTGDELSKQ HIRYMVGGRS
PLAHDERLFR FEFPERPGAL MKFLSSMAPN WNISLFHYRN QGADYSSILV GIQVPSAEDA
EFARFLATLG YPYWEETSNP VYRLFLA
|
|---|
| |