Gene Bphy_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0325 
Symbol 
ID6241827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp366930 
End bp367289 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content51% 
IMG OID642592089 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_001856564 
Protein GI186475094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.87551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA AGATCAGTGG ACACCATCTC GATGTAACGC CAGCGTTGCG AGAATACGTG 
ATCACCAAAC TAGACAGGGT GCTAAGACAT TTCGATCAGG TGATCGATGG CAGTGTGGTC
CTCTCGGTCG ACAACCACAA GGAAAAGGAA AAGAGACAAA AGGTTGAAAT CAACCTGCAT
CTGAAGGGCA AGGACATTTT CGTGGAAAGC TGTGATGGCG ACCTGTACGC CGCGATCGAC
CTGATGATCG ACAAGCTCGA CCGCCAGGTC ATTCGTCACA AGGATCGTCT GCAGGGCCAT
CAACACGAAG CGATCAAGTA TCAACCGCTA GCCGCACAAC CTGAAGTGCC ACCGCAATAA
 
Protein sequence
MNLKISGHHL DVTPALREYV ITKLDRVLRH FDQVIDGSVV LSVDNHKEKE KRQKVEINLH 
LKGKDIFVES CDGDLYAAID LMIDKLDRQV IRHKDRLQGH QHEAIKYQPL AAQPEVPPQ