Gene Bphy_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0143 
Symbol 
ID6244584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp157599 
End bp161189 
Gene Length3591 bp 
Protein Length1196 aa 
Translation table11 
GC content63% 
IMG OID642591905 
Product2-oxoacid ferredoxin oxidoreductase 
Protein accessionYP_001856382 
Protein GI186474912 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC GTCCACCCAT CGACGGCATC CCCGCGCTCG CCGATTACCG CCTCTCCGAC 
AACCTCACTG CCACGCGCGG CCGCATCTTC CTCACGGGCA CGCAGGCGCT CGTGCGCCTC
ACCTTGATGC AACGCCAACT CGACAAGGCG CGCGGCCTCA ATACGGCCGG TTTCATCAGC
GGTTATCGCG GTTCACCCCT CGGCATGGTC GACCAGCAAT TGTGGAAAGC GAAAAAACTG
CTCGACGCAA ACGACGTCCG CTTCCTCCCC GCGATCAACG AAGAACTCGG CGGCACCGCC
GTGCTCGGCA CGCAGCGCGT CGAAGCGGAC CCTGAACGCA CCGTCGATGG CGTCTACGCG
ATGTGGTACG GCAAAGGCCC CGGGGTCGAC CGCGCGGGCG ACGCGCTCAA GCACGGCAAC
GCATACGGCT CGTCGCAGCA TGGCGGCGTG CTGGTCGTCG CAGGCGACGA TCACGGTTGC
GTGTCGTCGT CGATGCCGCA TCAAAGCGAC TTCGCGATGA TCGCGTGGCA CATGCCCGTC
GTGAATCCGT CGAACGTCGC GGACATGCTC GAATTCGGCG TCTACGGCTG GGCGCTGTCG
CGTTACTCGG GTGCGTGGGT CGGCTTCAAG GCGATTTCGG AAACAGTCGA GTCCGGTTCG
ACCGTCGATC TCGACGCGCT GCAAACGCAA TGGCCCGCAC CCGAAGGCTT CGAAGCGCCC
GCCGGCGGCC TGCACAACCG CTGGCCGGAT CTGCCGAGCC TCACGATCGA ACAACGTCTG
CACGCGAAGC TCGACGCCGT ACGCCATTTC GCTCGCGCCA ACAGCATCGA CAAATGGATC
GCGCCAAGTC CGCATGCGAA CGTCGGCATC ATCACATGCG GCAAGGCACA TCTCGATCTG
ATGGAAGCGC TGCGCCGGCT CGATCTCACC GTGGCCGATC TGGAGCAGGC GGGCGTGCGA
ATCTACAAGG TGGGCCTGTC CTTCCCGCTC GAGATGACGC GTATCGATGC GTTCGTTTCC
GGGCTCTCCG ACGTGCTGGT GATCGAGGAG AAAGGCCCCG TCATCGAGCA GCAGATCAAG
GACTATCTGT ACAACCGCAC GCAAGGCGCG CGGCCCGCGA TCTTCGGCAA ACATGCGGAA
GACGGTTCGA TGTTGCTGTC GTCGCTCGGT GAACTGCGGC CGTCGCGCAT CCTGCCCGTC
TTCGCGAACT GGCTCGCGAA ACACAAACCA GCGCTCGATC GGCGCGAGCG CGTGGTTGAT
CTCGTCGCAC CGCAAATCCT CTCGAACGCC GCAGACGCCG TAAAGCGCAC GCCCTACTTC
TGCTCGGGCT GCCCGCACAA TACGTCGACA AAGGTGCCGG AGGGCTCCAT CGCGCAGGCG
GGCATCGGCT GTCACTTCAT GGCGTCGTGG ATGGAACGCG ATACCACGGG CCTGATCCAG
ATGGGCGGCG AAGGGGTCGA CTGGGCCGCG CATTCGATGT TCACGAAAAC GCGCCACGTG
TTCCAGAATC TCGGCGACGG CACCTACTTC CACTCGGGCA TTCTCGCGAT CCGCCAGGCC
GTCGCGGCCA AGGCGACGAT CACCTACAAG ATTCTCTATA ACGACGCCGT CGCGATGACG
GGCGGACAGC CGGTGGACGG CAGCATCTCC GTGCCGCAGA TCGCGCGGCA GGTCGAAGCG
GAAGGCGTGT CGCATTTCGT CGTAGTCAGC GACGAGCCCG AGAAATACGA CGGACATCAT
GGCCTGTTTC CGAAGGGCAC GACGTTCCAT CACCGCAGCG AGCTCGACAA GGTGCAGCGC
GAACTGCGCG ATATCGACGG CGTGACGGTG CTGATCTACG ACCAGACCTG CGCCGCCGAA
AAGCGCCGCC GCCGCAAGAA GGGCGAGTTT CCCGACCCGG ACAAACGCCT CTTCATCAAC
GAGGAAGTGT GCGAAGGATG CGGCGATTGC GGCGTGCAGT CGAATTGTCT GTCCGTCGAG
CCCGTTGAGA CACCGTTGGG CCGCAAGCGC CGCATCGACC AGTCGTCGTG CAACAAGGAT
TATTCGTGCG TGAACGGCTT CTGCCCGAGC TTCGTGACGA TCGAAGGAGG CAAGCTCAAG
AAAGCGGCGG GCGTTGCATT CGATGCAGCG GCGCTCGCCA CATGCGTCGA CGCGTTGCCT
CTGCCGACGA CTCAACTCGA CGCCGCGCCG TACGACATTC TTGTCACTGG CGTGGGCGGC
ACGGGCGTTG TGACCGTCGG CGCGCTGATC AGCATGGGAG CGCATCTGGA AGGCAAGAGT
GCGTCGGTGC TCGATTTCAT GGGCTTCGCG CAGAAGGGCG GATCGGTGCT GTCGTTCGTG
CGTTTCGCTG CGCGCGACGA GTGGCTCAAT CAGGTGCGGA TCGACACGCA GCAAGCCGAC
GTGCTGCTCG CGTGCGACAT GGTGGTCGGT GCGAGTGCCG ATGCCTTGCA GACGGTGCGT
CGTGGCCGCA CGCGGATCGT CGTGAACACG CATGCCATTC CGAATGCGTC GTTCGTGCAG
AACCCGGACG CGAATCTGCA TGCCGACGCG TTGCTCGACA AGATGCGTCA CGCAGCGGGC
GACGAGTTCA TGTCGTCGTG CGACGCGCAG TCGCTCGCGA CGCGCTTCCT CGGCGACACG
ATCGGCGCGA ACATCGTGAT GTTGGGCTTC GCGTGGCAAC TGGGTCTCGT GCCCATATCG
TTTGGGGCGA TGATGCGCGC GATCGAACTG AACAACGTCG CGGTGCAGAT GAACCAGCTG
GCCTTTTCGA TTGGACGCAT GGCTGCAGCC GACCCAGCCG GGCTCGAGGT GCTGTGGACG
CAACGTCATG CGGTTCATCC CGCAGTCTCG CTGGAATCGC TCGATGCGTT GTTAGCGGAT
CGCGAAGCGC GTCTTCACAC TTATGGCGGT GCTGCTTATG TGAAGCGGTA TCGTGCGCTG
GTCGATGCTG CGCGTCAGGC CGAGCGCGAG CTCGAACCGG CTAGCGGAGA GCGTTTGAGC
CGCGCGGTAG CGACGACGTT CTATCGATTG CTCGCGGTGA AGGACGAATA CGAAGTCGCG
CGCCTGCATA GCGATCCCGC GTTTCGTGCC GCGCTCGAAG CGCAATTCGA AGGTGTAGCG
GGCAAAGACT TCGGCGTGAA GTTCAATCTG GCGCCGCCGA CGATTTCACG CGCGAAGCAC
GGCGCGAAGC CGCAGAAGAA GACCTTTGGT CAATGGATGT GGCCAGTGCT CGGTTTGATG
GCCAAGTGGC GCGGTTTGCG CGGCACGGCT CTCGATCCGT TTGGCCACAC TGTCGAGCGG
CGCATGGAGC GTGAATTGTC CGCCGACTAT GAGACGACGA TGCAGCGTGC GTTTGCTGTT
CTCAGCCATG TCACTGCGGA CGATGTCGTC AGGCTCGCTG AGTTGCACGC GCGGGTGCGG
GGATATGGGC ATGTGAAGCT CGCGAATCTC GCTGCGGTTA AGCGCAGCGA GCGGGAGATT
GCGGCGCGGT TGCATATCGA GGCGGCTTCG GGCCCTGCCG TGGTCGATGC GCTTCAGGAG
GCCAAGGGCT TGGGGACGTT GCGGGGGATT CCTGTTGTCG TAGCCAAGTG A
 
Protein sequence
MTARPPIDGI PALADYRLSD NLTATRGRIF LTGTQALVRL TLMQRQLDKA RGLNTAGFIS 
GYRGSPLGMV DQQLWKAKKL LDANDVRFLP AINEELGGTA VLGTQRVEAD PERTVDGVYA
MWYGKGPGVD RAGDALKHGN AYGSSQHGGV LVVAGDDHGC VSSSMPHQSD FAMIAWHMPV
VNPSNVADML EFGVYGWALS RYSGAWVGFK AISETVESGS TVDLDALQTQ WPAPEGFEAP
AGGLHNRWPD LPSLTIEQRL HAKLDAVRHF ARANSIDKWI APSPHANVGI ITCGKAHLDL
MEALRRLDLT VADLEQAGVR IYKVGLSFPL EMTRIDAFVS GLSDVLVIEE KGPVIEQQIK
DYLYNRTQGA RPAIFGKHAE DGSMLLSSLG ELRPSRILPV FANWLAKHKP ALDRRERVVD
LVAPQILSNA ADAVKRTPYF CSGCPHNTST KVPEGSIAQA GIGCHFMASW MERDTTGLIQ
MGGEGVDWAA HSMFTKTRHV FQNLGDGTYF HSGILAIRQA VAAKATITYK ILYNDAVAMT
GGQPVDGSIS VPQIARQVEA EGVSHFVVVS DEPEKYDGHH GLFPKGTTFH HRSELDKVQR
ELRDIDGVTV LIYDQTCAAE KRRRRKKGEF PDPDKRLFIN EEVCEGCGDC GVQSNCLSVE
PVETPLGRKR RIDQSSCNKD YSCVNGFCPS FVTIEGGKLK KAAGVAFDAA ALATCVDALP
LPTTQLDAAP YDILVTGVGG TGVVTVGALI SMGAHLEGKS ASVLDFMGFA QKGGSVLSFV
RFAARDEWLN QVRIDTQQAD VLLACDMVVG ASADALQTVR RGRTRIVVNT HAIPNASFVQ
NPDANLHADA LLDKMRHAAG DEFMSSCDAQ SLATRFLGDT IGANIVMLGF AWQLGLVPIS
FGAMMRAIEL NNVAVQMNQL AFSIGRMAAA DPAGLEVLWT QRHAVHPAVS LESLDALLAD
REARLHTYGG AAYVKRYRAL VDAARQAERE LEPASGERLS RAVATTFYRL LAVKDEYEVA
RLHSDPAFRA ALEAQFEGVA GKDFGVKFNL APPTISRAKH GAKPQKKTFG QWMWPVLGLM
AKWRGLRGTA LDPFGHTVER RMERELSADY ETTMQRAFAV LSHVTADDVV RLAELHARVR
GYGHVKLANL AAVKRSEREI AARLHIEAAS GPAVVDALQE AKGLGTLRGI PVVVAK