Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmur_0799 |
Symbol | |
ID | 9141779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachyspira murdochii DSM 12563 |
Kingdom | Bacteria |
Replicon accession | NC_014150 |
Strand | + |
Start bp | 950833 |
End bp | 952806 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_003633097 |
Protein GI | 296125845 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.897954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATA AAAATGAAAT TCATATGATA ACAGCTGAAG AAATAGATGA TTATATGAGT AAATATGACA GTGAATCAAG ATACAGAAGA TATAATGATT GGAAAAAATA TTTAATCATA GTAATATCGG TAATATTCTG CTTGTTTCAA TTATATTCAA TACTTTCTGG AAGAATTACA GCACAAGTTG TAAGAGCTAC ACACTTGGCA TTTGTTATGC TTTTAGCATA TTTACTTTTC CCTATGAAAA AAGATATGCC TAAAGACAAA CTTCCATGGT ATGATGTAAT ACTTGCCGTT ATAGGTGCTG CTTCTTGGAG CTATATTACT ATAAATTTTG AATCTCTTGT AAGACGTGCA GGCATATATA CATCAACAGA CATTATAATA GGTATAATAG GTATACTTCT TGTATTTGAA GCGTGCAGAA GAATAGTAGG TCTTCCTATA CTTATAATAT CAATAGTTTT TATTATATAT GCATTATTCG GAGCTTATGC ACCGGGTTTT TTAAATCACA GAGGATACTC TCTTCAAAGA TTAGTTTCAC ACTTATTTTA TAATACAGAA GGTATAATGG GTACGCCTAT AGGAGCATCA GCTACATTTA TTTTCTTATT TATATTCTTT GGAGCATTAC TTGATAAAAC TGGAATAGGG CAGTTTTTTA TAGATATATG TAATGCCATA GCAGGAGGTT TTGACGGAGG TCCTGCAAAA GTAGCTGTAC TTACAAGTGC TATGTTTGGT ACTGTTTCTG GAAGTTCTGT TTCTAATACC GTAGGTACTG GGAGTTTTAC AATACCTATG ATGAAATCTT TAGGATATAG GCCTGAGTTT GCGGGTGCTG TTGAGGCTTC TGCTTCTACA GGAGGACAAT TAATGCCTCC TATAATGGGT GCTGCTTCTT TTCTTATGGC TGAAAGTTTG GGCATACCTT ATATGGAAGT TGCTAAAGCG GCTATTATTC CAGCTATTTT ATATTTTACT GGTATATTTA TAATGGTACA TTTAGAGGCT AAAAAAACAG GGCTTAAAGG TTTATCAAGA GATTCTCTTC CTAAAATAGG AGAGCTTTTG ATGAAAAAAG GATATTTAGT TATTCCGCTT CTTACTATAA TATATTTCTT TGTGCTTGGT AAAACTGCTA TATATGCTGG TTTAATGGGT ATTATTGCTG CTGCTATAGT TGCTTTAGTT AATTCTATAG TAGACATCAT AATGAAAAGA AAAGTAAGTT TTGGGCTTAA TGATTTAATA GACGTTTTTG TTAATGCTGC TAGAAATATT ATAAGTGTTG CTATCGCATG TGCTATGGCT GGTATTATAA TAGGAGTTAT TACTTTAACA GGTTTAGGAT TAAAAATAGG AGCAGGCTTA ATATCAATAT CCGGAGGAAT ACCTATACTT TTATTGTTCC TAACTATGAT TAGCTCAATA ATACTTGGTA TGGGAGTTCC TACTACTGCC AATTATCTTA TCACTTCTAC AATAGCGGCA AGTGCAATAA TAGGTTTAGG TTATGAACCT TTAGCTGCAC ATATGTTTGT ATTTTATTTT GGTATTATAG CAGATGTTAC TCCTCCTGTT GCTTTGGCTG CTATGGCTGG TGCTGCTATC GCTAAATCAG ATCCTCTTAA AACTGGAATA GAAGCAACAA AACTTTCAAT AGGTGCATTT ATTATTCCTT ATATGTTTAT ATTTAATCCA GACATATTAA TGATTAATAC TACCATATCT GATATTATAC CTATACTTAT AACTTCGCTT ATAGGTATGT TTGGAGTGTC TGCAGGATTA GAAGGTTATG TATTTAGAAA ATGCAAACCT TATGAGAGAA TATTATTTAT CATAGCAGGG CTTCTTTCTA TATACCCTGA AGTTTACAGC GATATTATAG GAATAGGAGT TATAGCTATA CTAGTGATTA TACAAATCAT TACAAAAAGG AAAAATCAAG CTGCAGCTGC TTAA
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Protein sequence | MKHKNEIHMI TAEEIDDYMS KYDSESRYRR YNDWKKYLII VISVIFCLFQ LYSILSGRIT AQVVRATHLA FVMLLAYLLF PMKKDMPKDK LPWYDVILAV IGAASWSYIT INFESLVRRA GIYTSTDIII GIIGILLVFE ACRRIVGLPI LIISIVFIIY ALFGAYAPGF LNHRGYSLQR LVSHLFYNTE GIMGTPIGAS ATFIFLFIFF GALLDKTGIG QFFIDICNAI AGGFDGGPAK VAVLTSAMFG TVSGSSVSNT VGTGSFTIPM MKSLGYRPEF AGAVEASAST GGQLMPPIMG AASFLMAESL GIPYMEVAKA AIIPAILYFT GIFIMVHLEA KKTGLKGLSR DSLPKIGELL MKKGYLVIPL LTIIYFFVLG KTAIYAGLMG IIAAAIVALV NSIVDIIMKR KVSFGLNDLI DVFVNAARNI ISVAIACAMA GIIIGVITLT GLGLKIGAGL ISISGGIPIL LLFLTMISSI ILGMGVPTTA NYLITSTIAA SAIIGLGYEP LAAHMFVFYF GIIADVTPPV ALAAMAGAAI AKSDPLKTGI EATKLSIGAF IIPYMFIFNP DILMINTTIS DIIPILITSL IGMFGVSAGL EGYVFRKCKP YERILFIIAG LLSIYPEVYS DIIGIGVIAI LVIIQIITKR KNQAAAA
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