| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_0138 |
|---|
| Symbol | |
|---|
| ID | 9141108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 169218 |
|---|
| End bp | 170228 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | |
|---|
| Product | polysaccharide biosynthesis protein CapD |
|---|
| Protein accession | YP_003632444 |
|---|
| Protein GI | 296125192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000000000749249 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAG ATAAAATTTT ATTAATAACC GGCGGTACTG GATCTTTTGG TAATAAAATG
CTTAGATACT TTATAAACAA TACTGATATA AAAGAAGTAA GAGTATTTTC TAGAGATGAA
GAAAAACAGG ATAGAATGCG TACTGAATTA AAAGATGATA GAATAAAATA TTATATTGGT
AATGTTAGAG ATTATAAAAG CATAAATGAA GCTTTAAGAA ATGTAGATTT TGTATTCCAT
GCTGCAGCGT TGAAGCAAGT ACCTTCTTGT GAATTTTATC CTATACAAGC GGTGCATACT
AATATAATTG GTTCAAGTAA TGTAATAGAT GCATGCATAG AAAATAAAGT AAAAAAACTT
GTTATGTTAT CGACCGACAA AGCCGTTTAT CCTATTAATG CTATGGGTAT GACAAAAGCT
ATTATGGAAA AATTAATGAT TTCAAAGTCT AGAAATTTAC CAAATGATGG TAATACCACT
TTATGTGCTA CTAGATATGG AAATGTTATG GCTTCAAGGG GGTCTGTTAT TCCATTATTT
ATAAAACAGT GTAAAGAAAA TAAACCAATA ACTGTAACAG ATCCTAATAT GACTAGATTT
TTAATGTCAT TAGATGAATC AGTAGACTTA GTATTATTTG CTTTCAATAA TGCTGTAAAT
GGAGATATTT TTGTTCAAAA AGCATCAGCA TGCACTATTA TGGATTTGGC ATTAGCAATT
AAGGAAATAT TTAATCCTAA TGTAGAAATA AAAATAATAG GTACAAGACA TGGCGAAAAA
ACTTATGAAA CTTTAATAAA TAAAGAAGAT ATGATTAAAG CTGTTGATAT GGGTAATTTC
TATAAAATAC CTGCCGATAA TAGGGATTTA AATTATGATA AATACTTTAT AGATGGTAAT
ACAGAAATAT CATCAAAAGA AGAATATAAC TCAGATAATA CCACTCGTTT AAATAAAGAA
CAAGTAAAAG AAAAGCTTTT GGCATTAGAT TATGTACAAA GTGAGCTTTA A
|
|---|
| Protein sequence | MFKDKILLIT GGTGSFGNKM LRYFINNTDI KEVRVFSRDE EKQDRMRTEL KDDRIKYYIG
NVRDYKSINE ALRNVDFVFH AAALKQVPSC EFYPIQAVHT NIIGSSNVID ACIENKVKKL
VMLSTDKAVY PINAMGMTKA IMEKLMISKS RNLPNDGNTT LCATRYGNVM ASRGSVIPLF
IKQCKENKPI TVTDPNMTRF LMSLDESVDL VLFAFNNAVN GDIFVQKASA CTIMDLALAI
KEIFNPNVEI KIIGTRHGEK TYETLINKED MIKAVDMGNF YKIPADNRDL NYDKYFIDGN
TEISSKEEYN SDNTTRLNKE QVKEKLLALD YVQSEL
|
|---|
| |