| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_3587 |
|---|
| Symbol | |
|---|
| ID | 5768860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | + |
|---|
| Start bp | 526478 |
|---|
| End bp | 527695 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641317890 |
|---|
| Product | outer membrane porin OpcP |
|---|
| Protein accession | YP_001583563 |
|---|
| Protein GI | 161520136 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.733081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTC TGACGACGCC GCGCCGGATC GCGGCGGCGG TGGCGGCGCT CGCCGTCGCG
CAGGGCGTGC AGGCATCGAG CAGCGTCACG CTGTATGGCG ACGTCGATGC CGGCATCACA
TACACGAACG ATCAGCAGAC GACGAGCGCC GACGGCAGCG TGCGCGGCGG CCGCGCCGTG
CAGATCGGCG GCGGCAATCT CGCACCGTCG CGCGTCGGCT TGACAGGCAG CGAGGACATC
GGCGGCGGCA CGTCCGTGAC GTTCAAGCTC GAGAACAGCT TCTGGACGGG CAGCGGCAGC
CTGCTGCAGG CCGGTACGCT GTTCAACCAG AACGCGTGGG TCGGCTTGAC GAACGAACGC
TACGGCACGC TCACCGTCGG CCGCCAGTTC GACGCGTACA CGACGACGCT CGCGCCGTAC
GCATCGAGCA TTCCGTGGGC GACGCTGTAC GGCTCGCATA TCGGCGACGT CGACAACCTG
AACGCGGCGC TCAACCTGAA CAGCGCGATT CAGTACGCGA GCCCGACCTT CGCGGGCTTC
TCGTTCAGCG GCACGTTTTC GTTCGGCGGC GTGGCCGGCG ATTTCTCGCG GCAGCGCGGC
TGGGCTTTGG CCGCCAGCTA CAACCGCGCG CCGTTCTCGT TCGGCGTGGG CGTGCTCGAT
CTGAACCGGC CGCTCGACGC GGCGCTCGGC GGCGCGAGCG GCTATATCGG CGATTTCGCG
TGCTCGAACC CGGCCGCGAT GTATTGCACG CTGCAGAATG CGCGATCGTT GACGGCGATC
GGCGCGGGCG GTGCGTACAC GATCGGGCCG CTGACACTCG GCCTCGTCTA CACGCATACG
ACGCTCGACG ACAGCCGGTA CTTTGCCGAT GCCGCGCATC CGCACGGCGC CGACGCACGC
TTCGACATCG TCGAGGTGAA TGCGGCGTTC GCGGTGTCGC CGGCGCTGAC GCTCGGCGCT
GCGTACATCT ACAACGCGAT GAAGACCGAC GCGAGCGGCT CGCCGACCTT CCATCAGGTC
AATCTCGGCG CGACCTACAA CCTCTCGAAG CGCACGGCGC TGTATGCGGT CGGCTTCTTC
CAGCAGGCCG CGGGGCACGG CATCGGTCGC GATCCGGCGA CGGGCGCGCC GGCCAACTAT
GCGCAGATTC CGAACCTGCC GAATGCGAAC GGCAATCGGC AGCTGGCATT GACGATGGGG
GTGCGGCACA ACTTCTGA
|
|---|
| Protein sequence | MNSLTTPRRI AAAVAALAVA QGVQASSSVT LYGDVDAGIT YTNDQQTTSA DGSVRGGRAV
QIGGGNLAPS RVGLTGSEDI GGGTSVTFKL ENSFWTGSGS LLQAGTLFNQ NAWVGLTNER
YGTLTVGRQF DAYTTTLAPY ASSIPWATLY GSHIGDVDNL NAALNLNSAI QYASPTFAGF
SFSGTFSFGG VAGDFSRQRG WALAASYNRA PFSFGVGVLD LNRPLDAALG GASGYIGDFA
CSNPAAMYCT LQNARSLTAI GAGGAYTIGP LTLGLVYTHT TLDDSRYFAD AAHPHGADAR
FDIVEVNAAF AVSPALTLGA AYIYNAMKTD ASGSPTFHQV NLGATYNLSK RTALYAVGFF
QQAAGHGIGR DPATGAPANY AQIPNLPNAN GNRQLALTMG VRHNF
|
|---|
| |