Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_0769 |
Symbol | |
ID | 5764979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010084 |
Strand | - |
Start bp | 842001 |
End bp | 842687 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641313184 |
Product | pseudouridine synthase |
Protein accession | YP_001578961 |
Protein GI | 161523949 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000104471 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCTTATA TAAGACAGAG GACTTGGCGT TCCGTATTAT GCATTAAGAT TCCGCCATTT GCCATAGAGC GCCCGCCGCC CCGCGCGCCG CGGGCCTGCG TCTCGCCCAT GACCCTGATC GCCCTCAACA AGCCGTTCGG CACGATTTGC CAGTTTTCCG CGCACGAAAC GCGGCCGTCG CTCGGCGACT GGGTAAAAAC GCCCGGCGTC TATCCGGCCG GCCGCCTCGA CGCGGACAGC GAAGGCCTGC TGCTGCTCAC CGACGACGGC GCGCTGCAGG CGCGCATCGC GGAGCCGCGC CACAAGCTCG TGAAGCGCTA CTGGGCGCAG GTCGAGGGCG CGCCGGGCCC GGCCGACCTG AAAGCGCTCG CGCGCGGCGT CGATCTCGGC GATTACGTGA CGCGCCCGTG CCGCGCCGAA TTCATCGAAC CGCCCGAGAC GCTATGGCCG CGCAACCCGC CGATCCGCTA CCGCGCGGCG ATCCCCACGA CCTGGATCGA ACTCGCGATC ACCGAAGGCA AGAACCGGCA GGTACGCAGG ATGACGGCGG CGGTCGGCTT CCCGACCTTG CGCCTCGTGC GTGTCGGCAT CGGCTCGCTC GACATATTCG CGCTCGGCAT TGCACCGAGC GAAACAATCG CGCTGCCGCC GCGCGCGCCG TGGGACGGTT TCGCACGCGA AGCCTGA
|
Protein sequence | MSYIRQRTWR SVLCIKIPPF AIERPPPRAP RACVSPMTLI ALNKPFGTIC QFSAHETRPS LGDWVKTPGV YPAGRLDADS EGLLLLTDDG ALQARIAEPR HKLVKRYWAQ VEGAPGPADL KALARGVDLG DYVTRPCRAE FIEPPETLWP RNPPIRYRAA IPTTWIELAI TEGKNRQVRR MTAAVGFPTL RLVRVGIGSL DIFALGIAPS ETIALPPRAP WDGFAREA
|
| |