Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_0241 |
Symbol | rpoB |
ID | 5765195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010084 |
Strand | + |
Start bp | 273156 |
End bp | 277262 |
Gene Length | 4107 bp |
Protein Length | 1368 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641312653 |
Product | DNA-directed RNA polymerase subunit beta |
Protein accession | YP_001578433 |
Protein GI | 161523421 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.060417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGC ATTCGCAAGA GTTTCGCGAA GCGCCCCATC GTTCACCAAG TTCCTTTCCT GCTGGCCACC CAGCTTGAAT CATTCAGCAC GTTTCTGCAA GCCGATGTGC CGGCGACGCA ACGCAAGCCT GAAGGTTTGC AGGCCGCTTT CACATCGGTA TTTCCCATTG TTTCGCACAA CGGCTTCGCG CGCCTCGAGT TCGTGAGCTA TGCGCTGTCC GCGCCGGCAT TCAACATCAA GGAATGCCAG CAGCGCGGCC TGACGTACTG CTCCGCGCTG CGCGCGAAGG TCCGCCTCGT CATCCTCGAC AAGGAATCGC CGAACAAGCC CGTCGTCAAG GAAGTGAAGG AGCAGGAAGT GTACATGGGC GAAATTCCGC TCATGACGCC GACCGGCTCG TTCGTCATCA ACGGCACCGA GCGTGTCATC GTCTCGCAGC TGCACCGTTC GCCGGGCGTG TTCTTCGAAC ACGACAAGGG CAAGACGCAC AGCTCGGGCA AGCTGCTGTT CTCGGCACGG ATCATTCCGT ACCGCGGCTC GTGGCTCGAC TTCGAATTCG ATCCGAAGGA CATCCTGTAC TTCCGCGTCG ACCGTCGCCG CAAGATGCCG GTCACGATCC TGCTGAAGGC GATCGGCCTC ACGCCGGAAC AGATCCTCGC GAACTTCTTC GTGTTCGACA ACTTCACGTT GATGGACGAA GGTGCGCAGC TCGAGTTCGT GCCCGAGCGC CTGCGCGGCG AAGTCGCGCG CTTCGACATC ACGGATCGCG ACGGCAAGGT CATCGTCCAG AAGGACAAGC GGATCAACGC GAAGCACATC CGCGACCTCG AAGCCGCGAA GACGAAGTTC ATCTCGGTGC CGGAAGACTA TCTGCTCGGC CGCGTGCTGG CGAAGAACGT CGTCGACGGC GAGACGGGCG AAGTGATCGC GAACGCGAAC GACGAGATTA CCGAAAGCGT GCTCGAGAAG CTGCGCGAAG CGGGCATCAA GGAAATCCAG ACGCTCTACA CGAACGATCT GGACCAGGGC CCGTACATCT CGTCGACGCT GCGTGTCGAC GAAACGACCG ACAAGACGGC CGCGCGCATC GCGATCTACC GCATGATGCG TCCGGGCGAG CCGCCGACCG AAGAAGCGGT CGAGGCGCTG TTCAACCGTC TGTTCTACAG CGAAGAAGCG TACGACCTGT CGAAGGTCGG CCGCATGAAG TTCAACCGCC GCGTCGGCCG TGACGAAATC ACGGGCCCGA TGACGCTGCA GGACGACGAC ATCCTCGCGA CGATCAAGAT CCTCGTCGAG CTGCGCAACG GCAAGGGCGA AGTGGACGAC ATCGACCACC TCGGCAACCG TCGCGTGCGT TGCGTCGGCG AACTGGCGGA AAACCAGTTC CGCGCGGGTC TCGTGCGCGT CGAGCGCGCG GTCAAGGAAC GCCTCGGCCA GGCCGAAAGC GAAAACCTGA TGCCGCACGA CCTGATCAAC TCGAAGCCGA TTTCGTCGGC GATCCGCGAG TTCTTCGGTT CGTCGCAGCT GTCGCAGTTC ATGGACCAGA CCAACCCGCT GTCGGAAATC ACGCACAAGC GCCGCGTTTC CGCACTGGGC CCGGGCGGTC TGACGCGCGA GCGTGCAGGC TTCGAAGTCC GCGACGTGCA CCCGACCCAC TACGGCCGCG TGTGCCCGAT CGAAACGCCG GAAGGTCCGA ACATCGGTCT GATCAACTCG CTCGCACTGT ACGCGCACCT GAACGAGTAC GGCTTCCTCG AGACGCCGTA CCGCAAGGTC GTGGACGGCA AGGTCACCGA TCAGATCGAC TATCTGTCGG CGATCGAGGA AGGCCGTTAC ATGATCGCGC AGGCGAACGC GGCGATCGAC GACGAAGGCC GACTGACCGA CGAACTCGTG TCGTCGCGTG AAGCTGGCGA AACGATGATG GTCACGCCGG ACCGCATCCA GTACATGGAC GTGGCGCCGT CGCAGATCGT GTCGGTCGCG GCATCGCTGA TTCCGTTCCT CGAGCACGAC GACGCGAACC GTGCACTGAT GGGTTCGAAC ATGCAGCGTC AGGCCGTGCC GTGTCTGCGT CCGGAGAAGC CGGTCGTCGG TACGGGCATC GAGCGTACCT GCGCGGTCGA CTCGGGCACG ACGGTTCAGG CGTTCCGCGG CGGTGTCGTC GACTACGTCG ACGCAGGCCG TATCGTGATT CGCGTGAACG ACGACGAAGC GGTCGCAGGT GAAGTCGGTG TCGACATCTA CAACCTGATC AAGTACACGC GTTCGAACCA GAACACGAAC ATCAACCAGC GTCCGATCGT GAAGATGGGC GACAAGGTCT CGCGCGGCGA CGTGCTGGCC GACGGCGCCT CGACGGACCT GGGCGAGCTC GCGCTCGGCC AGAACATGCT GATCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAGGAT TCGATCCTGA TCTCGGAGAA GGTCGTGGCC GACGATCGCT ACACGTCGAT CCACATCGAA GAGCTGAACG TCGTTGCACG CGACACGAAG CTCGGGCCGG AAGAAATCAC GCGCGACATC TCGAACCTGG CGGAAGTCCA GCTCGGCCGT CTCGACGAAT CGGGCATCGT CTACATTGGT GCGGAAGTCG AAGCGGGCGA CGTGCTGGTC GGCAAGGTCA CGCCGAAGGG CGAGACCCAG CTGACGCCGG AAGAGAAGCT GCTGCGCGCG ATCTTCGGCG AGAAGGCGTC GGACGTGAAG GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACCG TGATCGACGT CCAGGTGTTC ACGCGTGAAG GCATCCAGCG CGACAAGCGT GCGCAACAGA TCATCGACGA CGAACTGAAG CGCTACCGTC TCGACCTGAA CGACCAGCTG CGCATCGTGG AAGGCGACGC GTTCCAGCGT CTCGCCCGCA TGCTGGTGGG CAAGGTCGCG AACGGCGGTC CGAAGAAGCT CGCGAAGGGC ACGAAGATCG ACCAGGCTTA CCTGGAAGAT CTCGACCACT ACCACTGGTT CGACATCCGC CTCGCGGATG ACGAAGCAGC GGCGCAGCTC GAAGCGATCA AGAACTCGAT CGAAGAGAAG CGTCACCAGT TCGATCTGGC GTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA CTGCCGCCGG GCGTGCTGAA GATGGTCAAG GTGTACCTGG CGGTGAAGCG CCGTCTGCAG CCTGGCGACA AGATGGCAGG CCGTCACGGC AACAAGGGTG TCGTGTCGAA GATCGTGCCG ATCGAAGACA TGCCGTACAT GGCCGACGGC CGTCCGGCAG ACGTCGTGCT GAACCCGCTC GGCGTGCCGT CGCGGATGAA CGTGGGTCAG GTTCTGGAAG TGCACCTCGG CTGGGCCGCG AAGGGCCTCG GCTGGCGTAT CGGCGAAATG CTGCAGCGTC AGGCGAAGAT CGAAGAGCTG CGTGCGTTCC TGACGAAGAT CTACAACGAG TCGGGTCGCG CGGAAGATCT GGACAGCTTC TCCGACGACG AGATCCTCGA ACTCGCGAAG AACCTGCGCG AAGGCGTGCC GTTCGCGACG CCGGTGTTCG ACGGTGCGAC CGAGGACGAA ATGGCGAAGA TGCTCGACCT CGCGTTCCCG GACGACATCG CGAAGCAGCT CGACATGAAC CCGTCGAAGA ACCAGGTTCG CCTGTACGAC GGTCGCACGG GCGAGCCGTT CGAGCGCCGC GTGACGGTCG GCTACATGCA CTACCTGAAG CTGCATCACC TTGTCGACGA CAAGATGCAC GCGCGTTCGA CGGGCCCGTA CTCGCTCGTC ACGCAGCAGC CGCTGGGTGG TAAGGCGCAG TTCGGTGGTC AGCGTTTCGG TGAAATGGAA GTGTGGGCGC TCGAAGCGTA CGGCGCATCG TATGTGCTGC AGGAAATGCT GACGGTGAAG TCGGACGACG TGACGGGCCG GACCAAGGTG TACGAGAACC TGGTCAAGGG CGATCACGTG ATCGATGCAG GCATGCCGGA ATCCTTCAAC GTGCTGGTGA AGGAAATCCG CTCGCTCGGT ATCGATATCG ATCTCGACCG CAATTAA
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Protein sequence | MQYSFTEKKR IRKSFAKRPI VHQVPFLLAT QLESFSTFLQ ADVPATQRKP EGLQAAFTSV FPIVSHNGFA RLEFVSYALS APAFNIKECQ QRGLTYCSAL RAKVRLVILD KESPNKPVVK EVKEQEVYMG EIPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR IIPYRGSWLD FEFDPKDILY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMDE GAQLEFVPER LRGEVARFDI TDRDGKVIVQ KDKRINAKHI RDLEAAKTKF ISVPEDYLLG RVLAKNVVDG ETGEVIANAN DEITESVLEK LREAGIKEIQ TLYTNDLDQG PYISSTLRVD ETTDKTAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEEA YDLSKVGRMK FNRRVGRDEI TGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV VDGKVTDQID YLSAIEEGRY MIAQANAAID DEGRLTDELV SSREAGETMM VTPDRIQYMD VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKPVVGTGI ERTCAVDSGT TVQAFRGGVV DYVDAGRIVI RVNDDEAVAG EVGVDIYNLI KYTRSNQNTN INQRPIVKMG DKVSRGDVLA DGASTDLGEL ALGQNMLIAF MPWNGYNFED SILISEKVVA DDRYTSIHIE ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK RYRLDLNDQL RIVEGDAFQR LARMLVGKVA NGGPKKLAKG TKIDQAYLED LDHYHWFDIR LADDEAAAQL EAIKNSIEEK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ PGDKMAGRHG NKGVVSKIVP IEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA KGLGWRIGEM LQRQAKIEEL RAFLTKIYNE SGRAEDLDSF SDDEILELAK NLREGVPFAT PVFDGATEDE MAKMLDLAFP DDIAKQLDMN PSKNQVRLYD GRTGEPFERR VTVGYMHYLK LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK SDDVTGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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