Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3878 |
Symbol | |
ID | 6197924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010578 |
Strand | - |
Start bp | 2746 |
End bp | 4068 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641703744 |
Product | O-antigen and teichoic acid-like export protein |
Protein accession | YP_001830896 |
Protein GI | 182676788 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0679948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCTATC TGTATCCCAT TATATTCAGA TATGCTTCCC TGGTTCTGCA ATTCGTGGTC ATGGTTTTTA TCACACGCAG ACTGTCTCAG GGCGATGCTG GCATTTATTT GCAACTTTTC GGCATCATCA ACGCGACCTA TGTCTTTGTC GGCTTTGGTA TTCCCGATGG AATTGTGAAA TCGGTCGCGC ATGCCGACGC CCTCGACCGT CGACATGAGA TCCGGCCATT GGTTCGACGC GCCGCGCTTG CCACGGGGAG CACTTCCCTG GTCATGCTCA TTCTCGGCGT GACGGCTGCA GAGCTCTTCA ACGGGGGCTA TGGCGAAGAC CGTAGCCTGA TCATCCTCGC GGCTATTTGG TGGCTCTGCT ACGGCGCGAC ATTCTTTGCC GCTCAAGTGC TCGTCGCCCT CGGCGAAAGC GGCAAGGGAG CATTTTTCTT CTATCCCGCG ATGAACATCG CCTTGTTCGG GACCTCCGTG CCTTATCTTG CGCTTGCGAC GACGCCTGAT ATCCAGGCCA CACTTGTCGC GACGATCATC GGGGGCCTTT TATGCAGCGT GGCGGCCCTC GCGACCGCAG GCTTCTATTA TTCTACCTTT CCTTCCTCCT CCGAGCCTGT ATCGCTGCGA CCCGCGATGC GGCTCGGATT TTCGATTGGC CTTTCGCGCG TCCTTCAAAG CTCGATCCAC TGGATTCCAG TCTGGGGCAT CGGCGCCTTT CATGGTGCCG CCGCCGCTGC CACTCTGGGC ACCGCCTCAC GGCTCAATGT CGCCATTGCC GCTGTCATGG CGGCTATTCG TTTCACTATT CGTCCGGTCA TCGTGCGTCA TGCTGCCCGT AACGATTGGC AGGAGATCGC CATCGAGAGT TCCAAAGTCG CGACGCTTGC CACCCTCGTT AGTTTCGTGG CGCTCGCCGG CACGCTTCTG CTCGGGCCAT TTGCCATCGG CCTGATCTTT GGCGAGAGCT ATCGTGCCTC GGCCCTCCTT CTTGCCATTC TGCTTTTCGG CACATTAGGG GAGTGTGTCG GGGGCCCGGT CGATGAGATC CTCAAAATGA CCAGCCGGGC CAATATTGTG CTCGCCATCT TGATTTGCGC GACGATGAGC GAGGCTCTAT TGGTTTGGAT ATTCGGCGGT TTCGATGTCA TCGTCACGGC CGTAATCCAG GCTGGCACCT TCGTCGGCAT GTATGGATTC ATGCTTTGGT TCGTCTGGCG CAAACATGGC GTCTGGGTCG GAGCAAACTT CACCCCTGCC TATATACAGA CTCTTTTTCC CCGCCGGGGC GCTGTGAAGG GAGCGGAGGA TATCTTGTCA TGA
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Protein sequence | MRYLYPIIFR YASLVLQFVV MVFITRRLSQ GDAGIYLQLF GIINATYVFV GFGIPDGIVK SVAHADALDR RHEIRPLVRR AALATGSTSL VMLILGVTAA ELFNGGYGED RSLIILAAIW WLCYGATFFA AQVLVALGES GKGAFFFYPA MNIALFGTSV PYLALATTPD IQATLVATII GGLLCSVAAL ATAGFYYSTF PSSSEPVSLR PAMRLGFSIG LSRVLQSSIH WIPVWGIGAF HGAAAAATLG TASRLNVAIA AVMAAIRFTI RPVIVRHAAR NDWQEIAIES SKVATLATLV SFVALAGTLL LGPFAIGLIF GESYRASALL LAILLFGTLG ECVGGPVDEI LKMTSRANIV LAILICATMS EALLVWIFGG FDVIVTAVIQ AGTFVGMYGF MLWFVWRKHG VWVGANFTPA YIQTLFPRRG AVKGAEDILS
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