Gene Bind_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3546 
Symbol 
ID6199292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp4027258 
End bp4028079 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID641707502 
Producttwo component transcriptional regulator 
Protein accessionYP_001834592 
Protein GI182680446 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.376665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.686762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTC AACCCTCGAA CACGGCTTCG ACCACCCCCG AGACCACGCC TTCCGGCCCA 
GCGAGCCAGC CCGCGACCCC GCCGGCAAGC ACGCCAGCCA GCCAGGCAAG CCCGGCCGTA
CCCGCCGATG ACGCGGCGCA TCTTCTCATC GTCGATGACG ATCGGCGGAT CCGGGCGCTT
CTGGCGCGTT TTCTGGCCGA TCAAGGCTAT CGCGTGACGA CGGCCGGCAA TGCGGAGGAA
GCCACCGCAT CCCTACGGAA TTTCGCCTTC GATCTCATCG TGCTCGATGC CATGATGCCG
GGCGAGAACG GATTTGACCT CCTGACGCGG CTGCGCGCGC AACCGTCCGA TCTCGCGCAT
GTCCCCGTCC TGATGCTGAC CGCCTGCACC GAGCCGGAAG ATCGCGTCCG GGGCTTTGAG
GCCGGCAGCG ACGATTATCT CGGCAAACCC TATGAGCCGC GCGAATTGGC GCTGCGCATC
GCCTCCATTC TGCGCCGCGC CCAGCCACGC GCCGTCTCGG GTCCCGTGAC GCAAGTCCGT
TTCGGCGATT TCACCTTTGA TCTCGAGCGC GGCGAATTGC AGCAGGGGGG CGAGATCGTC
CGGCTGACCG AGCGCGAACG CGACATGCTG CGGCTGCTCG CCGAAAATGC CGGCGAAATC
GTCAGCCGTG AGGCTCTCGC GGGGCTCGGC ATCGGCGGCA ATGAGCGCAC GGTCGATGTC
CAGGTTAATC GCCTGCGACG CAAGATCGAG CGGGATCTCG CCAATCCTCT GCATTTGCAG
ACGGCGCGCG GCGCAGGCTA TCGCCTGCTG GTCGATCGAT GA
 
Protein sequence
MTLQPSNTAS TTPETTPSGP ASQPATPPAS TPASQASPAV PADDAAHLLI VDDDRRIRAL 
LARFLADQGY RVTTAGNAEE ATASLRNFAF DLIVLDAMMP GENGFDLLTR LRAQPSDLAH
VPVLMLTACT EPEDRVRGFE AGSDDYLGKP YEPRELALRI ASILRRAQPR AVSGPVTQVR
FGDFTFDLER GELQQGGEIV RLTERERDML RLLAENAGEI VSREALAGLG IGGNERTVDV
QVNRLRRKIE RDLANPLHLQ TARGAGYRLL VDR