| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3426 |
|---|
| Symbol | |
|---|
| ID | 6198877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3888656 |
|---|
| End bp | 3890578 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641707373 |
|---|
| Product | cobalt chelatase, pCobT subunit |
|---|
| Protein accession | YP_001834472 |
|---|
| Protein GI | 182680326 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
|---|
| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.23963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.334691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGA ACCAGAAGCC CCCCACCAAG ATCGAAAGTC CGCAAGAGCC CTTCAAGCGC
GCGGTTGCCA GCTGTATGCG CGCGCTCGCC GGCGCGCCGC AGCTCGAGGT CACCTATGCG
CCGGAAAAGC CGAGCCTGAT CCAGAGTGGC GCGGTGGTGC GCGCCCGTCT GCCTGATCTG
CCGCGCAAAT TCGACAAGCG TGAGGTCGCG GTGCTGCGCG GCCAAGCCGA TGCCATGGCT
TTGCGTCTAG CCTGCCACGA CAATGAGTTG CATCGCCGCC TGATGCCGCA ATCCTCCTCC
GCCCGCGCCG TCTTCGATGC CGTCGAACAG GCCCGTGTCG AGGCCATTGG CTCGCGGCGG
ATGGCGGGCG TGTCCGCCAA TCTCAATGCC ATGCTCGAGG AGCGTTTTCA GCGCGGGCGC
TATGCTGAGA TCACCAACCA GGCCGATGCG CCGATCGAGG AAGCCCTGGC GCTCATGGTG
CGGGAACGGC TGACCGGTCT AAAGCCTCCA AAACAAGCGC AGACGATCGT CGATCTCTGG
CGGCCCTTCG TGGAAGGGAA GGCTGGAGCC GATCTCGACA AGCTCGGTGA TACGATCGAG
GATCAGCGCG CCTTCGCCCA TTCGATTCAC AAGCTCCTGA CCTCGCTTGA CATGGCTGAG
GAAGGCCAGT CCCCGGATGA AATGGACGAG GAAGATTCTA ATGAGCAGGA GCAGGACGCC
AACCAGGAGA ATATGAGCCA GGAAAGCTCC GACGAGACCA TGGGCGATAT CGGGCAGCAG
CAGCAATCCG ATGCGCAGCC CCAAAGCATG GAAGAGGGCG AGTTCGAGGA GACCGAGGCG
CAGACTGGCG ACTTCGAGGA AGAAAGCGAT TATTCGGAAG CCGAGGAGGC CGGCGATCCG
CGCCGCCCGC CGACGTCCCA GCGTGCCGAG CCGAAGGGCT TCGAATACAA GCCCTTCACG
CGGCGTTATG ACGAGACCAT TGCCGCCGAG GATCTGTGTG AGGCGGAGGA ATTGGAACGC
CTGCGCGCCT ATCTCGACAA GCAATTGCAG AATCTCTCCT CGGTCGTGGC GCGGCTCGCC
AATCGCCTGC AGCGCCGGCT CATGGCGCAG CAGAATCGAT CCTGGGAATT CGATCTTGAG
GAAGGCATGC TCGATCCGGC ACGCCTGCCG CGCGTCATCA TCGATCCGCA ACAGCCTTTA
TCCTTCAAGC AGGAAAAGGA CACCGACTTC CGTGATACGG TCGTGACGCT TCTGCTCGAC
AATTCGGGTT CGATGCGCGG CCGCCCAATC ACCGTTGCCG CGACCTGCGC CGATATTCTG
GCGCGCACGC TGGAGCGTTG CGGCGTCAAG GTCGAGATTT TGGGCTTTAC CACGCGGGCC
TGGAAGGGCG GGCAATCTCG CGAGGCCTGG CTGCATGCGG GCAAGCCGCC GATGCCCGGC
CGTCTCAATG ATCTGCGCCA CATCATCTAT AAATCCGCCG ACGCGCCCTG GCGGCGAGCC
CGAAAGAATC TCGGCCTGAT GATGCGCGAG GGGCTGCTCA AGGAAAATAT CGACGGCGAG
GCTTTGGACT GGGCGCATAA GCGCCTTTTG GCTCGGCCAG AGCAACGCAA GATTTTGATG
ATGATTTCCG ATGGCGCGCC AGTCGATGAT TCGACTCTCT CGGTCAATCC GGGCAATTTC
CTCGAGAAAC ATCTGCGCCA GATGATTGAG GAGATCGAGA CGCGCTCACC GGTGGAACTG
ATCGCCATCG GCATCGGCCA TGACGTCACG CGCTATTATC GCCGGGCCGT GACGATCGTC
GATGCCGAAG AACTCGGCGG CGCCATGACC GAGAAACTCG CCGAATTGTT CAGCGAAAAG
GCCGAGCCGA AAAAGTTTGC GTCATCGCCG CGCAAGATGC TGGTGCCGTC TTCTCTTCAT
TGA
|
|---|
| Protein sequence | MSSNQKPPTK IESPQEPFKR AVASCMRALA GAPQLEVTYA PEKPSLIQSG AVVRARLPDL
PRKFDKREVA VLRGQADAMA LRLACHDNEL HRRLMPQSSS ARAVFDAVEQ ARVEAIGSRR
MAGVSANLNA MLEERFQRGR YAEITNQADA PIEEALALMV RERLTGLKPP KQAQTIVDLW
RPFVEGKAGA DLDKLGDTIE DQRAFAHSIH KLLTSLDMAE EGQSPDEMDE EDSNEQEQDA
NQENMSQESS DETMGDIGQQ QQSDAQPQSM EEGEFEETEA QTGDFEEESD YSEAEEAGDP
RRPPTSQRAE PKGFEYKPFT RRYDETIAAE DLCEAEELER LRAYLDKQLQ NLSSVVARLA
NRLQRRLMAQ QNRSWEFDLE EGMLDPARLP RVIIDPQQPL SFKQEKDTDF RDTVVTLLLD
NSGSMRGRPI TVAATCADIL ARTLERCGVK VEILGFTTRA WKGGQSREAW LHAGKPPMPG
RLNDLRHIIY KSADAPWRRA RKNLGLMMRE GLLKENIDGE ALDWAHKRLL ARPEQRKILM
MISDGAPVDD STLSVNPGNF LEKHLRQMIE EIETRSPVEL IAIGIGHDVT RYYRRAVTIV
DAEELGGAMT EKLAELFSEK AEPKKFASSP RKMLVPSSLH
|
|---|
| |