| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3359 |
|---|
| Symbol | |
|---|
| ID | 6198906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3812230 |
|---|
| End bp | 3813321 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641707305 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001834405 |
|---|
| Protein GI | 182680259 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.710892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.120793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCCT ATATCCTCCG CCGCCTCTTA TTCATGATTC CGACGATCTT CGGTATTTTG
CTGATTTCCT TCGTCATTGT GCAATTCGCG CCGGGCGGCC CGGTCGAGCG CGTCCTTGCG
CAATTGCAGG GGACGGATGC CGGCGCCACG GCCAATATCG GCGGCGGTGG GGCGGCAATG
GGCACCGCCA ATAGCGCCGA TTTTTCGTCG AAATATCGCG GCGCGCAGGG GCTTGATCCG
AAATTCATCG CCGAACTCGA AAAGCAATTC GGTTTCGACA AGCCGGCCTA TGAACGGTTC
TACCTGATGC TGCGCAATTA TCTGCGCTTC GATTTTGGCC GTTCCTATTT CCGCGACGAG
CCGGTGATCA AGCTGATCGG CGAAAAATTG CCGGTCTCCA TCTCGCTCGG CGTATGGATG
ACGCTGATCT CCTACGCGAT CTCGATTCCG CTTGGCATCA AAAAGGCCGT GGCGGATGGT
TCGCGCTTCG ATATGTGGAC CTCGGCCGTC ATCATCATCG GCTATGCGAT TCCGAGCTTT
CTCTTCGCCA TCCTGCTCAT CGTTTTATTT TGCGGCGGCT CGTTCTGGCA GATCTTTCCG
CTGCGCGGCC TGACATCTGA AAACTGGGCG GATCTCTCCT GGCCGGCTCG CATCGCTGAT
TATTTCTGGC ACATCACTTT GCCGGTTCTT TCGCTCAGCC TGGGAGCTTT CGCCACCTCG
ACCTTCCTCA CCAAAAATTC CTTCCTTGAT GAAATTCGCA AGCAATATGT CCAGACCGCC
CGCATGAAGG GCCTGACCGA GACCCAGGTG CTGTATGGTC ATGTCTTTCG CAATGCAATG
ATGATCGTGG TCGCTGGCTT TCCCGGCGCC TTCCTCTCGG CCTTCTTTAC CGGCTCCCTG
CTCATCGAGA CGATTTTCTC GCTCGATGGC CTCGGCCTTC TCTCCTTCGA ATCGATCGTC
AACCGCGATT ATCCGATCGT CTTCGCCAAT CTCTATATAA TGGCGCTGCT CGGGCTCGTG
GTGAATCTCC TCTCGGATCT CACTTATATG TGGATCGATC CGCGCATCGA TTTCGAGACG
CGGGAGGTCT GA
|
|---|
| Protein sequence | MFAYILRRLL FMIPTIFGIL LISFVIVQFA PGGPVERVLA QLQGTDAGAT ANIGGGGAAM
GTANSADFSS KYRGAQGLDP KFIAELEKQF GFDKPAYERF YLMLRNYLRF DFGRSYFRDE
PVIKLIGEKL PVSISLGVWM TLISYAISIP LGIKKAVADG SRFDMWTSAV IIIGYAIPSF
LFAILLIVLF CGGSFWQIFP LRGLTSENWA DLSWPARIAD YFWHITLPVL SLSLGAFATS
TFLTKNSFLD EIRKQYVQTA RMKGLTETQV LYGHVFRNAM MIVVAGFPGA FLSAFFTGSL
LIETIFSLDG LGLLSFESIV NRDYPIVFAN LYIMALLGLV VNLLSDLTYM WIDPRIDFET
REV
|
|---|
| |