| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3224 |
|---|
| Symbol | |
|---|
| ID | 6198936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3668830 |
|---|
| End bp | 3669915 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641707173 |
|---|
| Product | lysine--tRNA ligase |
|---|
| Protein accession | YP_001834273 |
|---|
| Protein GI | 182680127 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.428603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCG AACATCCGGC AAAAACTCGG GCCCTTTCTC ATGCCCCCTG GTGGGATAAA
AAGGCTTATC ATCTGCGGCG GCCGAAACTC CTCGCCCGCG CCCGGATGAT CGAGGCCACT
CGGACATTCT TCAAGGCCCA GGACTTCATC GAGGTCGATA CGGCGATTTT ACAAGTCTCG
CCGGGCAATG AGACCCATAT CGGCGCTTTT GCCACGGCCT GGCGTCCCTT GGGCGGAAAC
AGCGCGCCTC TTTATCTTCA CACCTCGCCG GAATTTGCCG CCAAGAAATT GCTGGCCGCC
GGGGAGGAGA GGATTTTCAC CTTCACCCAT GCTTTCCGCA ACGATGAGCG CGACCGGCTG
CATCATCCCG AATTCATGAT GCTCGAATGG TATCGCGCAG AGGCGCCTTT CGAAGTTCTC
ATGTTCGATT GTGCGCGGCT CCTGGCCCTG ACGGCCCAGG CGGCAGAGGC CAAAATCCTG
TCCTATCGGG GCCGTGTCGC CGATCCTTTC ACTGAACCGG AACAACTCAC CGTCTGCGAG
GCTTTCCAGC GTTACGCTGG GATTGATCTT GAGGCTTTTT TGCCGGGCGG GCCGGAGACC
TTTGAAGCCT TTGCCGCGAA AACACGGGAA CTCGGCCTCC GTGTCGCTCC CGACGATGAT
TGGTCTGATC TTTTCAGCAA AATCCTGTCT GACCGGATCG AACCGAAGCT CGGGCAGGGC
AGGGCGACCT TTTTGACCGA TTATCCGGCT TGCGAGGCGG CACTTGCGCG CTTGCGCGCG
GATTCGCGTT TTGCTGAACG GTTCGAGCTT TATGCCTGTG GCGTCGAACT CGCCAATGGG
TTTGGTGAAT TGACCGATCC CGTTGAACAG GAACGCCGTT TTGAAGCTGC CATGGCCGAG
CGCTTGCGGA TCTATGGCGA GGCCTATCCA ATCGACCCGG ATTTTCTGGC CGCGCTCGCG
CAAATGCCGG AAGCCTCCGG CATTGCATTC GGCTTCGACC GTCTCGCTAT GCTGGCGACG
GGAAGCGATG ATATTGCCGA GGTTTTATGG ACGCCCGTCG CGGAGTCGCC GGGGGAAGGC
GCATGA
|
|---|
| Protein sequence | MTSEHPAKTR ALSHAPWWDK KAYHLRRPKL LARARMIEAT RTFFKAQDFI EVDTAILQVS
PGNETHIGAF ATAWRPLGGN SAPLYLHTSP EFAAKKLLAA GEERIFTFTH AFRNDERDRL
HHPEFMMLEW YRAEAPFEVL MFDCARLLAL TAQAAEAKIL SYRGRVADPF TEPEQLTVCE
AFQRYAGIDL EAFLPGGPET FEAFAAKTRE LGLRVAPDDD WSDLFSKILS DRIEPKLGQG
RATFLTDYPA CEAALARLRA DSRFAERFEL YACGVELANG FGELTDPVEQ ERRFEAAMAE
RLRIYGEAYP IDPDFLAALA QMPEASGIAF GFDRLAMLAT GSDDIAEVLW TPVAESPGEG
A
|
|---|
| |