| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3159 |
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| Symbol | |
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| ID | 6201379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3605311 |
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| End bp | 3607974 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641707107 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_001834209 |
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| Protein GI | 182680063 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.457417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.706665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAT CTCAAGCTCC AGACGGAACG GCGCCCACCA CTCCTTCCCC GGGTCCGATC
ACCCAGGCCG TCGTCTGGCT CGTCCTTGCC TGCAGCCGCC TCGCCTGGCC AGTCGTCATC
ATTGCCGCCC TGGTCAGCTG GGGCGCCGCG CATTACTCCG TCACGCATTT CGCGATCAAC
ACCAATACGG CGGATTTCAT TTCCGCCAGA CTGCCCTGGC GCCAGAATCT CCTGAAAGTC
GACAAGACCT TTCCCGAACG CAGCAATCAG ATTGTCGTGG TTGTTGACGG CAAGACCCCG
GAACTCGCGG AAGCTGCCAC CGCGCAATTG ACGGCGCGCA TGAAGGCAAA GCCGGACCTG
TTCCAATTCG TCGCGCGGCC CGAGGGAGGC GATTATTTCA ATCGCAATGG TCTCCTTTTC
CTGCCGACCC CTGTCCTGAA GGAGACTTTG CAGGGACTTT TCCGTGCGCA GCCCTTCCTC
TCCAATCTGA GCGCTGATCC CAGTCTGCGT GGCATTGCCG ATTCGATGGG CTTCATCACC
AAGGGCGTGC GTTCGGAAGC GGGCACGTTC GATGATTTCG ATCGGCCCAT GGCCGCTTTG
AATCCCGCGC TTGAAGGGGT TCTGGCAGGC AAGCCGGTCT TTTTTTCCTG GCGCAGTCTG
GTCAGCGGCG AAGCACCGGA CCCGCGCGAA TTGCGCCGCT TCATCCTCGC CCAGCCCGTG
CTCGATTACT CGGCCCTGAA GCCTGGCGAA GTCCCCTCCG ATTTTATCCG TGCGACGAGC
CGCGAACTCG GTCTCACCGA GGACAAGGGC GTCAATGTCC GCCTGACCGG CCCGGTGCCC
CTCGCCGACG AGGAATTTTC CACCGTCGCT GATGGCATCG CCTTAAACAG CGCGCTCACC
GCCTTTCTCG TCATGTTCCT GATCTGGCGC GCGGTCCATT CCTTCAAAAT CGTCATCGCG
GTGGCGCTCA GCGTCACGGT CGGACTTCTC GTGACAGCCG CCGTCGGCCT CATGATGGTC
GGCGCCTTGA ATCTCATTTC GGTCGCCTTT GCCGTGCTTT TCGTCGGCAT CGGCGTCGAT
TTCGGCATTC AATTCAGCGT CCGTTATCGC GCCGAACGTT ATGCGAATCC CGATTTCACA
ACAGCCTTGA CCAAGGCCGC GATCAGAGTC TCACGGCCCT TGTCGCTTGC CGCCATCGCC
ACGGCGGCCG GCTTCTATTC CTTCCTGCCG ACCGATTATC GCGGCGTCTC CGAACTCGGC
CTTATCGCCG GCACGGGTAT GTTCATCGCC TTCGCTGCCT CCATCACCGT GCTGCCGGCG
CTCTTGACCT TGATCAAGCC GCCGCCGGAA AAGGAGCCCG TCGGCTATCT CTTCCTGGCG
CCGGTCGATG AGTTTCTGAC CAAGCACCGC TATTTCGTCG TTTTCGGCAC GCTCGCCCTG
GCGCTCGCGG CTACGCCCCT CCTGGCCAAG CTGCGTTTCG ATTTCAACCC AATCAATCTG
CGCAATCCAA AAGTCGAATC AGTCGCGACC CTGCTCGATC TGATGCGTCA CCCTGACACT
GACACCAATA CGATCAATAT CCTCGCGCCC TCTCTCGATG CCACCGTCCC CCTCGTGGAG
CGCCTGGAAA AACTGCCCGT CGTCGCGCGC GTGACCACGC TGAACAGCCT CGTCCCGCCA
GACCAAGAGG AAAAACTGCC ACTCATCGAG AAAGCCGCCA CGCAGCTCGG CCCGATGCTC
GATCCCGGCC GGAGGCTGGA CAAGCCGACC GACGCGGAGG ACATAGCCGG CTTGCGGAAG
GCCGCCTCGG CCTTTACCGC GACCGCGGGC GATACGCAGG GTAAAGGCGC CGACGATGCC
CGCCGCCTCG CCAAATTGCT CAATGCCCTC GCCGATGCGC CGGCCGAGGT GCGCGAGGCC
GCGCGCAAAG CCTTGTTGCC GGGCCTCGAC ACGATGCTGG ATCTGTTGCG GCAATCGCTG
AGCGCGAAGA AAACCACTGT CGCGACGATT CCGACCGATC TCACCCGCCT CTGGGTCGCC
GCCAACGGCT CCGCCCTCAT CGAGGTCGCG CCCAAGGGCG ATCCGAACGA TAATCAAAAT
CTCGTCCGCT TCAGCCAAGC CGTGCAACAG ATCGCACCCG ATGCCACTGG TGAGCCGATC
GCCTTGCAGG AATCCGGCAA GACCGTCGTG CAAGCCTTCC TTCAGGCCGG TACCTGCGCC
TTCCTGTCGA TCGCCGTGCT GCTCTGGATC GTCTTGCGGC GCGTCTCTGA TGTGCTGATG
ACCCTGGTGC CGCTGTTGCT CGCCGGTGTC GTGACACTGG AACTGACGGT GCTGCTCGGC
CTGCCCTTGA ACTTCGCCAA TATTATCGCC CTGCCGCTGC TGCTGGGTCT CGGCGTCGCC
TTCAAGATCT ATTTCGTGAT GGCCTGGCGG GCGGGAACAA CCCATCTGCT GCAATCGAGC
CTGACCCGGG CGGTGTTTTT CAGCGCGATG ACCACGGCCG TGGCCTTCGG CAGCCTTTGG
CTCTCGAACC ATCCGGGCAC GTCGAGCATG GGCAAACTGC TCGCCTTGTC CCTGGTCTGC
ACGCTTCTCG CCGCCATTCT GTTCCAGCCG GCTCTGATGG GACCGCCGCG CCATCCGGAA
GCCGCGCCGC AGAAGGAAAA CTAA
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| Protein sequence | MITSQAPDGT APTTPSPGPI TQAVVWLVLA CSRLAWPVVI IAALVSWGAA HYSVTHFAIN
TNTADFISAR LPWRQNLLKV DKTFPERSNQ IVVVVDGKTP ELAEAATAQL TARMKAKPDL
FQFVARPEGG DYFNRNGLLF LPTPVLKETL QGLFRAQPFL SNLSADPSLR GIADSMGFIT
KGVRSEAGTF DDFDRPMAAL NPALEGVLAG KPVFFSWRSL VSGEAPDPRE LRRFILAQPV
LDYSALKPGE VPSDFIRATS RELGLTEDKG VNVRLTGPVP LADEEFSTVA DGIALNSALT
AFLVMFLIWR AVHSFKIVIA VALSVTVGLL VTAAVGLMMV GALNLISVAF AVLFVGIGVD
FGIQFSVRYR AERYANPDFT TALTKAAIRV SRPLSLAAIA TAAGFYSFLP TDYRGVSELG
LIAGTGMFIA FAASITVLPA LLTLIKPPPE KEPVGYLFLA PVDEFLTKHR YFVVFGTLAL
ALAATPLLAK LRFDFNPINL RNPKVESVAT LLDLMRHPDT DTNTINILAP SLDATVPLVE
RLEKLPVVAR VTTLNSLVPP DQEEKLPLIE KAATQLGPML DPGRRLDKPT DAEDIAGLRK
AASAFTATAG DTQGKGADDA RRLAKLLNAL ADAPAEVREA ARKALLPGLD TMLDLLRQSL
SAKKTTVATI PTDLTRLWVA ANGSALIEVA PKGDPNDNQN LVRFSQAVQQ IAPDATGEPI
ALQESGKTVV QAFLQAGTCA FLSIAVLLWI VLRRVSDVLM TLVPLLLAGV VTLELTVLLG
LPLNFANIIA LPLLLGLGVA FKIYFVMAWR AGTTHLLQSS LTRAVFFSAM TTAVAFGSLW
LSNHPGTSSM GKLLALSLVC TLLAAILFQP ALMGPPRHPE AAPQKEN
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