| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2836 |
|---|
| Symbol | |
|---|
| ID | 6201577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3232461 |
|---|
| End bp | 3233270 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641706783 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001833894 |
|---|
| Protein GI | 182679748 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.348617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAT TGCAGGGTAA AATCGCTGTC GTCACCGGTG GCACGCAGGG GCTTGGCGCC
GCCATTGCCC GGACATTCGC TGAACGTGGC GCGGCCGGAA TCGTCATTTG TGGCCGCTCG
AAGGAAAAGG GCGAAGCCAA GGCCAAGGAG ATTTCCTCGA CGACTGGGAC GGACGTGGTC
TTCGTTCCTG CCGATCTCAG TCAGGTGGAC GATTGCCTTG CCGTGGTCAG ACGCGCGGAT
GCGAAATTCG GCCGGATCGA CGCACTCGTC AATGCTGCGG GAGCCACCGA TCGCGGCACC
ATCATCGATA CGTCGCCCGA ACTGTTCGAC AAGATCTTCG CGGTGAATGT CAAAGGTCCC
TTCTTCCTCA TGCAAGAAGC CATCAAGCTC ATGCGGCGTG AGGGCACCGA AGGGACCATC
GTCAACATCT GTTCCATGTC GGCGAAGGCG GGGCAGCCCT TCATCGCTGC TTATTGCAGC
TCCAAGGGCG CGCTCGCGAC ATTGACAGAG AATACAGCTT ATACGCTGCT CCGTAACCGT
ATCCGTGTCA ACGCACTCAA TATCGGCTGG ATGGCTTCCG ATGGTGAGGA TCAAATCCAG
AAGAGCTATC ATGGAGCAAG CGATGGTTGG CTAGAAAAAG CCGCCGCCGC CCAGCCGTTC
GGCCGGCTGA TCGATCCCGA CGAGGTCGCG CGCGCGGTTG CCTTTCTCTC CAGTGACGAA
TCCGGCCTCA TGACCGGAAG CGTCATCAAT TACGACCAGT CTGTTTGGGG CGCCTACGAT
TCAGCCCCCA ACCCGACCGC TCCACTCTAG
|
|---|
| Protein sequence | MSALQGKIAV VTGGTQGLGA AIARTFAERG AAGIVICGRS KEKGEAKAKE ISSTTGTDVV
FVPADLSQVD DCLAVVRRAD AKFGRIDALV NAAGATDRGT IIDTSPELFD KIFAVNVKGP
FFLMQEAIKL MRREGTEGTI VNICSMSAKA GQPFIAAYCS SKGALATLTE NTAYTLLRNR
IRVNALNIGW MASDGEDQIQ KSYHGASDGW LEKAAAAQPF GRLIDPDEVA RAVAFLSSDE
SGLMTGSVIN YDQSVWGAYD SAPNPTAPL
|
|---|
| |