| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2817 |
|---|
| Symbol | |
|---|
| ID | 6201737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3208519 |
|---|
| End bp | 3209292 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641706764 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001833875 |
|---|
| Protein GI | 182679729 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC ATAGGATCAA GGGAAAGACG GTGCTCATCG CAGGCGGCGC CAAAAATCTC
GGCGGCTTGA TCGCCCGCGA TTTGGCGGAG CAGGGTGCCA AAGCTGTGGC CATCCATTAC
AATAGTGCCG CGACCACGGC TGAGGCGGAG AAAACCATCG CTGCAATCAA GACAGCCGGC
GCCCAGGCAT TCGCCTTCCA GGCCGATCTG ACCACGGCCG GTGCAGTGGA AAAACTTTTT
GCCGATACGA TCGCCGCGGT TGGCAAGCCG GATATTGCCA TCAATACGGT CGGCAAGGTT
TTGAAAAAGC CTTTCGTCGA GATTTCCGAG GCTGAATATG ACGAAATGGC TGCGGTAAAT
GCCAAAACCG CTTTCTTCTT CATCAAGGAA GCCGGCAAAC ATCTGAACGA CAACGGCAAG
CTCGTGACGC TCGTCACCTC CCTGCTCGGC GCTTTCACGC CCTTTTATGC GGCTTATGCC
GGCACCAAGG CGCCAGTCGA GCATTTCACC CGTGCAGCGT CCAAGGAGTT TGGCGAACGC
GGCATTTCGG TGACGGCGGT TGGCCCCGGC CCGATGGATA CGCCGTTCTT TTATCCGGCC
GAGGGCGCGG ATGCTGTCGC CTATCACAAG ACAGCGGCGG CGCTCTCCCA ATTCTCCAAA
ACTGGCCTGA CCGATATTGA GGATATCGTG CCCTTCATTC GATTTCTCGT CTCGGACGGA
TGGTGGATTA CCGGCCAGAC CATCCTCATC AATGGTGGTT ACACGACGAA GTGA
|
|---|
| Protein sequence | MADHRIKGKT VLIAGGAKNL GGLIARDLAE QGAKAVAIHY NSAATTAEAE KTIAAIKTAG
AQAFAFQADL TTAGAVEKLF ADTIAAVGKP DIAINTVGKV LKKPFVEISE AEYDEMAAVN
AKTAFFFIKE AGKHLNDNGK LVTLVTSLLG AFTPFYAAYA GTKAPVEHFT RAASKEFGER
GISVTAVGPG PMDTPFFYPA EGADAVAYHK TAAALSQFSK TGLTDIEDIV PFIRFLVSDG
WWITGQTILI NGGYTTK
|
|---|
| |