Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2554 |
Symbol | |
ID | 6198763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2914186 |
End bp | 2916771 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641706531 |
Product | TonB-dependent receptor |
Protein accession | YP_001833645 |
Protein GI | 182679499 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGTG AAGCGCGGCG GCTCAGGAAG CGGCTCCTGT CGGGAGTATC TTCGACCTCA TTCATGCTGG GCATTGCACT GGGGGCCCTC CCCCATGATC TGCACGCCCA GGACGCGCAT GCAGGCATGA AAGGCATGCA TATGGGTTCG GAGCCGGCGG CGGATAACGC TGCGCCGGCA AACGCGCAAT CGACCACCGG CGCATCGGAT GCGGGTCATG TCGATGATGT CGTCGTCACC GGCCAAGCCG CGCAAGATGA CGGCGAAGCC TTGATGATGG AAGTGATGAT GAAGACCCCG CGCGGAGGTG ACGTCGTCAC AGGCAAACAA GCTCAGCAGC AGCAGATCAG GCGCCTGACG GATGTGCAGC AAATCATTCC GAATTTCCGG CCGAACATCG CCCAGCCACG TCAATCCCGT CAGGCGATCC GTGGCGTTGG CATCGCCGCG GGTTCGGCGG GAACCGGCTC TCCTTCGGAT ACCGGCTATA TGGTCGATAA CGTGAGCTGG TTGTTCGCTG GCTGGCAATG GGGCAATTTG GTTGATTTCA GCTCGATCGA ACTCATCCTC GGGCCGACGG GCACCGCCGG CGGTCACAAT ACGAATGTCG GCACGATCTC CATCCGCACG CAATTGCCAT CCTTTGTCCC CAGCGCCACG GCCGAAACCA CCGTGGGGAA TTATAATCAT ATCATTGAAA ACCTTGTTTT CACCGGGCCT CTCATCGACG ACCGGCTGGC TTATCGCGTT ACTTTCTACG TCGATAAGGG CGATGGCTGG ATTCGCGACC AGGGCACGGG CACGACTTAT CTCGATAACA ACCGGCTTGG CTTTCGCGGA CAATTGCTTG GTGTCGGCGA TGGAATGACC GATCGCCTCA TCTTCAATTT CAATGCCTCC AATGAACATG ACGATTATCT TTTGGGCACG GTCGGTGACA CGAGTCTGAT CTATGCCAAT GGCACGAGGC CCACGGCAAC ATTTTTCCAG AATATGCAAA CCAAGCTCGG AAAGCAGGCC CTGACGACCA ATCCTTATGC GCCTTATGCG ACACGGATGG GCCGTGATCC GACGCACACA TATACATTAT CGAACGAATT GAACTGGCAG ATCGGCCAAA ACACCCTGAC CGTCATTTCG GCCGGAGGCT ATGGTTCCTT TGAGAATAAT GGCTTCCAAG GTGTACAAAA TACCACCCTT GGCTTCGGCG CCGAGGGCAT GGGCGGCATG AATACCTATT TGTGGCAGGT TTCTCAGGAA GTGAGGCTCT CGTCTCCCAC GGATCAGCCG GTAGAATGGA AAGCCGGCCT TTATTCCGTC TTCGAAAATG CCTGGGATAA AATGCATCAT ACCTATTTTG GCTGGGATTC TGCCGCTTGG CTGAATAATC CTGCGGCCAT GCCTGGACTT TATACTAGAT GGCACAACAA TGCGCGGGAT TTTCAAATTG CCGCCTACGG GCAAACGACC ATCCATTTCG ATCCAAGTTT CGCACTAACC TTCGGATTAC GTGACAGCTA CGATATCCGC TATGGATCAG ATACATTTTA CCCGATGTTC ATTGAAGGGA CGCCGTTCTC TCATGCACAG CAAGAGGCGG CGCTTATCCA GGCCGGTAGT TACGGTTCGG CCGATACAGG CGGTTTTACC AAATATCACA ATGCCGTCAC CGGAATCGTC AATCCGGAAA TCAAGATCAA TGACAACATC CGGCTGTGGG GCCTTATTGG CCGTGGCGAC AAAGTCTCGG CGGTGAATAC GCAAGACGTT CCGATTTACA TCAATGGACA ATTCAACGGC TTCACCCCGA TGTTCAATAA GCCAGAAACG TCCTGGGATT ACGAAATTGG CGTCAAGACG AGCTTTTTCG ACGACAAATG GATTTCCAAC GTCAATCTCT ATTGGAACGA TCTTTATAAC TTCCAAGCGA GTTCCAACCA AACCTTCACG AGCCCGGCTG GCGTAGTCAC AAACGTCGCT TTTCTCGCCA ACGTGCCTCA CGTCCGGCTG CGTGGCATCG AATTCGTCGA ACGTCTGGCT ATTAACGAGG AATTGAATTT TCACGCCACG GGCGCTTATA CCGAAGCGCG CTATATCAGC TATCCCAATT CTCCGGCGCC ACCCGATTTC GCCTTCTCCG GTGGGCCGGC GATTGTGTCT CTGTCGAATA CCCGGCTCAC GGGCATACCC TGGTGGTCGT TTTCGATCGG CTACAATTAC GAACATCCAG TGGGTGCATT ACTCCGTGAT CTCGGAGACG CGTTCCATGT CGAACTCGGC GATTGGGCGA ATGCCTCTCT GGTCGGTTAC AGTTATGGCA ATGTCGATTG GTTTTATAAG ACACAATTGA CCAGCCCCGT CTCTTATGTC CAATATTGGC AAGCACCTTA TTCGATCGTC AATGCCGGCA TAGGTCTGCG CACGGAGGAC AATAAATATA GCCTGACCCT ATGGGGCAAG AACCTGTTCA ACGCCTTGCC TTTCACCTCC TGGGCTTATG GTAATGCGAA CGCCTCGACG CAGGTCGGCA TTTCCACATT GGGACCGCGC TTCTTCGGCG CGACAGTCAT GATGACACTT TGGTAA
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Protein sequence | MDCEARRLRK RLLSGVSSTS FMLGIALGAL PHDLHAQDAH AGMKGMHMGS EPAADNAAPA NAQSTTGASD AGHVDDVVVT GQAAQDDGEA LMMEVMMKTP RGGDVVTGKQ AQQQQIRRLT DVQQIIPNFR PNIAQPRQSR QAIRGVGIAA GSAGTGSPSD TGYMVDNVSW LFAGWQWGNL VDFSSIELIL GPTGTAGGHN TNVGTISIRT QLPSFVPSAT AETTVGNYNH IIENLVFTGP LIDDRLAYRV TFYVDKGDGW IRDQGTGTTY LDNNRLGFRG QLLGVGDGMT DRLIFNFNAS NEHDDYLLGT VGDTSLIYAN GTRPTATFFQ NMQTKLGKQA LTTNPYAPYA TRMGRDPTHT YTLSNELNWQ IGQNTLTVIS AGGYGSFENN GFQGVQNTTL GFGAEGMGGM NTYLWQVSQE VRLSSPTDQP VEWKAGLYSV FENAWDKMHH TYFGWDSAAW LNNPAAMPGL YTRWHNNARD FQIAAYGQTT IHFDPSFALT FGLRDSYDIR YGSDTFYPMF IEGTPFSHAQ QEAALIQAGS YGSADTGGFT KYHNAVTGIV NPEIKINDNI RLWGLIGRGD KVSAVNTQDV PIYINGQFNG FTPMFNKPET SWDYEIGVKT SFFDDKWISN VNLYWNDLYN FQASSNQTFT SPAGVVTNVA FLANVPHVRL RGIEFVERLA INEELNFHAT GAYTEARYIS YPNSPAPPDF AFSGGPAIVS LSNTRLTGIP WWSFSIGYNY EHPVGALLRD LGDAFHVELG DWANASLVGY SYGNVDWFYK TQLTSPVSYV QYWQAPYSIV NAGIGLRTED NKYSLTLWGK NLFNALPFTS WAYGNANAST QVGISTLGPR FFGATVMMTL W
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