| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2265 |
|---|
| Symbol | |
|---|
| ID | 6200320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2599733 |
|---|
| End bp | 2600251 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641706253 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001833371 |
|---|
| Protein GI | 182679225 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.97009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CGATCATCAA TATTGCGGAC GTTGCACTGC ATCCGCGTCC TCCGGGTTTC
GCGCCGACTG GCGCGGTGGC GGAGCGCTAT GATGCACGGA TGGGTTTTAT TGGCGCGGGT
CTTGGTGCCT CTAAGCTCGG TTACAATATC ACCGCCATAC CTCCGGGCAA GCGGGCTTTT
CCATTCCACA ATCATCGCGT GAACGAGGAA ATGTTCTTCG TGATCACTGG CACTGGTGAG
ATTCGCATCG GCGAAAACAC CTATCCCATC CGGGAAGGCG ATATCATCGC TTGCCCGGCC
GGTGACAAGG AGACCGCGCA TCAGATCGTC AATACCGGAA CGCAGGAACT GCGTTATCTG
GGCGTCAGTA CCAAACTTTC GCCCGAGATC GCCGAATATC CGGATACGGG GAAGTTCGGT
GTCCTCGCCG AATATTCACC CGGCCCCGAT GGACAACCAA ACAGGTTCGC CTTCGTTGGC
CGGGCAGAAC AAAGCACCGA TTATTGGGAA GGGGAATAA
|
|---|
| Protein sequence | MTKPIINIAD VALHPRPPGF APTGAVAERY DARMGFIGAG LGASKLGYNI TAIPPGKRAF
PFHNHRVNEE MFFVITGTGE IRIGENTYPI REGDIIACPA GDKETAHQIV NTGTQELRYL
GVSTKLSPEI AEYPDTGKFG VLAEYSPGPD GQPNRFAFVG RAEQSTDYWE GE
|
|---|
| |