Gene Bind_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2152 
Symbol 
ID6199788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2457083 
End bp2458294 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content55% 
IMG OID641706141 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001833261 
Protein GI182679115 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGT TCAAGTATAA GCTTCCTTTC AAGCTTCGGC TTCTCCTGAT CGCCTTGTCG 
TTGTCGAATG TCTTTCCCCT GCCCAATGCC AAAGCACAAC AGACGCAGGA GACCAAGCCC
GCACCTGCTC TCGATTATCA GCCCGTGAAA TTAGGATCGG ATGCACAAAA AAACGCGGAA
TTGGCGACTG TGATTGTGCA TGACGGCACG CTTTCCCGCA TCATCCCTGC CCTCGCCTCC
GTCATGGCCG ATGATGCGCG GACACTTCAT CTCAAGCCAG CCGGTTCCGG CAAGGTCATG
AGCATCAATC TGATCCTCGG GGCTAGGGTC GCCAAAGGCG ATATCCTTCT CGAATACCGG
GATAATGCGC TTCGCGTCGC CAATGTCCAG GTCACACAGG CTCAGGCCGC CCTAGAGGCC
GCGATTGCAG CCCAAGATGA GGCCGAGGCC GCCTATCAGC GTGCGCGGCA ATTGGCTGGC
GGCGCCATAT CACGTGGCGA AGTCAGCAGG CGTTATGCCT TGCTGCAAGA AGCCAAGAGC
ACCGTCGCGA TGCGGCAGGC AGATATTACC AACACATCCA ATAGGATCAA AGAATTCAAT
ACGGCAACGG AACAAGGTGA TCATCTGCAG ACATCATCGC TTATCGCACC TGTCGATGGC
CTCGTCCTCG CCGTCAATAC GTCGATGGAT GGCGATCTGA CTGCCGGTCA AGACGTCGCG
ACAATCGTCG ATCTCTCCTC CGTCTGGGTC GTATCGGAAG TCCCGCCTAT GGACGCCGCT
TTCATTACAA TGGGAGCCCA TCAATATAGT TTTCTTGCTG GTCGACCCGA AACGCGGATC
GATTCCGTTG TCGAAACGAT CGATGGTGTC GTCAATCCGG CCACCGGCCT CATCCGTATC
CGTAGCCACA TTCCCAATAA GCACTATGCG CTCAGGCCCG GCATGATGCT GGAAGCCCGC
ATCACCTCAA CCACCAAGAT CAGTGGCGTT ATCGTTCCCT CCGAGGCAGT CCAGCAAATT
AACGGCAATG ATGTCGTCTT TATTCCGATC GATGCTGACA GCTTTCAACC GCGCGCCGTC
AAGATCGGTC TCGAAAGCGA TGGACAAACA ATCATTCTCA GTGGATTGAA GGACGGCGAA
TCCGTTGTCA CGCGTGGGAG CTTTACCTTG AAATCGGTCA TGCTTCTGGC CGATACGGCG
GGTGGAGATT GA
 
Protein sequence
MNMFKYKLPF KLRLLLIALS LSNVFPLPNA KAQQTQETKP APALDYQPVK LGSDAQKNAE 
LATVIVHDGT LSRIIPALAS VMADDARTLH LKPAGSGKVM SINLILGARV AKGDILLEYR
DNALRVANVQ VTQAQAALEA AIAAQDEAEA AYQRARQLAG GAISRGEVSR RYALLQEAKS
TVAMRQADIT NTSNRIKEFN TATEQGDHLQ TSSLIAPVDG LVLAVNTSMD GDLTAGQDVA
TIVDLSSVWV VSEVPPMDAA FITMGAHQYS FLAGRPETRI DSVVETIDGV VNPATGLIRI
RSHIPNKHYA LRPGMMLEAR ITSTTKISGV IVPSEAVQQI NGNDVVFIPI DADSFQPRAV
KIGLESDGQT IILSGLKDGE SVVTRGSFTL KSVMLLADTA GGD