Gene Bind_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2014 
Symbol 
ID6199294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2299528 
End bp2300190 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID641706001 
Producthypothetical protein 
Protein accessionYP_001833125 
Protein GI182678979 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.36455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT TGTTTATGTG TGGCTATTTT CCTGACTTGG CGGGCGTGTA CGATGCATGG 
CCTCTGGATT ATCAGGATGC TTTTTCGTTT TGTCGCGCTG TCCGAACTGG CCAATTCGAA
CGCAATTTTT CCGTTCATAC GCAGAAGGAT CCAGTCAGGG TTTGCGCGTC CAATGTTGGT
GTCGCTCGCC GTGCTTTCGG ACGGTTCATT GAACGCCGTA TCACGGAGGA AACATCATGG
CCTTCGCCAG TTCTCGTTCC CATGCCGTCT GAAGATGCGG TCATCGGCGT TGGAACATTT
CGTTCCTGGT TTATGCTGAA CGAGGCCATG GCTCCGACCG AATTCAAATT ATCGCCTGTT
GACGCCTTGT TCTGGCGGGA AAAGCCTTCG CCGCAGGTTC TGACCGCGGG GCGGGATGAG
CTTTCAACGC TGACGAAGGA TTTGATTTGT GATTTCCCGT TGCGTGGTCA GACCGTGGTG
TTAGTGGATG ATCTGGTCAG CAGTGGAACC ACGCTTTTGG CCGCGCGCGA TTGCCTGCAA
CGTGAAGGCG CGGCCGTTCT CGGTGCGGTG GTTTGCGGCA AGGTCATTCA TGATCGCAAG
ACACCTGCAT TCGGAAGGCA GGAATTTTGG GTCGATGACG ATGGAACGGC TGATCCATCA
TGA
 
Protein sequence
MKVLFMCGYF PDLAGVYDAW PLDYQDAFSF CRAVRTGQFE RNFSVHTQKD PVRVCASNVG 
VARRAFGRFI ERRITEETSW PSPVLVPMPS EDAVIGVGTF RSWFMLNEAM APTEFKLSPV
DALFWREKPS PQVLTAGRDE LSTLTKDLIC DFPLRGQTVV LVDDLVSSGT TLLAARDCLQ
REGAAVLGAV VCGKVIHDRK TPAFGRQEFW VDDDGTADPS