Gene Bind_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1924 
Symbol 
ID6198784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2193916 
End bp2195367 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content58% 
IMG OID641705913 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001833037 
Protein GI182678891 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTGGA CGCGATTCCA GGCTTGGCCC CTGCAATCGG TTGAAACCAT GCCTCGTTAT 
CTCCTCGTCG CGCTGATCGT GGCCTGCGCT TCCTTCATGG AAAATCTCGA CGCGACGGTC
ATTTCGACCG CATTGCCGGC GATCGCCGCC GATCTGCATG AAGATCCGAT CGCGCTCAAG
CTTGCCATGA CGTCCTATCT TCTTTCACTC GCCGTCTTCA TTCCGATTAG CGGCTGGGCC
GCCGATCGGT TCGGCGCCCG CACGATTTTT TGCGCCGCGA TCGTCGTCTT TACGCTGGGT
TCGATTCTCT GCGGCTTTTC CGGCACCCTG CCGGAACTCA TCGGCGCCCG TATCATTCAG
GGCCTCGGCG GAGCCATGAT GGTTCCGGTT GGCCGGCTGG TTCTCTTGCG CAGCGTGGAA
CGCGCCGATC TGGTCCGGGC TTTGTCCTAT CTCATGGTCC CGGCCCTGCT TGGTCCTGTG
ACGGGGCCAA TCGTTGGTGG TTTCATCACC ACCTATTTCC ACTGGCGGTG GATTTTCTGG
ATCAATGTGC CGATCGGCAT CCTCGGCTTC ACCCTCGCCA TGATCTTCAT CGAGAATATC
CGCGAAGATG AGGCAAAACC GCTCGATCGC TCTGGTTTCC TGCTGTGCGG CCTGGGACTT
GGCATGCTGA TCTTCGGCTT TGCCGGCGCG GGGCGTGGAC TGGTCTCCCC CTTGGCCATC
GCCTTGCTCG CCGGCTGTGG TGGGCTTTGC CTCACGCTTT ACGTTCGTCA TGCAAAGCGG
GTCGCCCATC CGCTGATCGA TCTGCAACTC CTCGCCATTC CGACATTCCG CGCCAGCATT
GTGGGTGGCT CGCTGTTTCG CATTGGCATT GGCTCACTGC CATTCCTTTT GCCCCTGATG
CTCCAAATCG GCTTCGGAAT GACCCCGTTC CAATCGGGCA TGGTCACCTT CATCTCCTCC
GTCGGCGCGC TTTTGATGAA GACAACCGCG ACCCCGATCC TGCGGCGCTT CGGATTTCGC
TTCATCCTGA TCTACGATGT CATCCTCAGC GCGATCATTC TCACCTCTTA TGGATTTTTC
ACCGTCTCGA CCCCCATGCT CGCGATGATG AGTCTGCTCC TCGCCGGCGG TTTTTTCCGC
TCGCTGGCCT TCACCAGCAT CAATGCCATT GCCTATGCCG ATATCGATCA TGACAGGATG
AGCCAGGCGA CGAGCTTTGC CTCAGTCGCA CAGCAATTAT CCCTCAGTAT CGGCATCGCA
TTTGCCGCCG GCATTCTGCA GGGTTTGAGC TTTTTCCAGG CAGAGGGCGA TCCCTTTACA
TTGGATAATT TCAAATGGGG TTTTATCGGC GTCGGTCTGA TTTCAGCCGC ATCCGTTTTC
GTCTTTCGGA CTCTCCCACA AGATGCTGGA GCGGAGCTTG CGAGCCGCCC ACAGACGGAG
AGCGCTGGCT AA
 
Protein sequence
MVWTRFQAWP LQSVETMPRY LLVALIVACA SFMENLDATV ISTALPAIAA DLHEDPIALK 
LAMTSYLLSL AVFIPISGWA ADRFGARTIF CAAIVVFTLG SILCGFSGTL PELIGARIIQ
GLGGAMMVPV GRLVLLRSVE RADLVRALSY LMVPALLGPV TGPIVGGFIT TYFHWRWIFW
INVPIGILGF TLAMIFIENI REDEAKPLDR SGFLLCGLGL GMLIFGFAGA GRGLVSPLAI
ALLAGCGGLC LTLYVRHAKR VAHPLIDLQL LAIPTFRASI VGGSLFRIGI GSLPFLLPLM
LQIGFGMTPF QSGMVTFISS VGALLMKTTA TPILRRFGFR FILIYDVILS AIILTSYGFF
TVSTPMLAMM SLLLAGGFFR SLAFTSINAI AYADIDHDRM SQATSFASVA QQLSLSIGIA
FAAGILQGLS FFQAEGDPFT LDNFKWGFIG VGLISAASVF VFRTLPQDAG AELASRPQTE
SAG