| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1871 |
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| Symbol | |
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| ID | 6199553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 2131515 |
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| End bp | 2133686 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641705858 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001832984 |
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| Protein GI | 182678838 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.292946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA AGCGGGCTTC CAAATCACTG ACGAAAGGGG CAATCGCCCT GACCATCGGC
GCCATGGCGG CCCTCGGTTT CCACGAGATG AACCTCGATG GAATAAGGCT CAAGGACAAG
ACGCCTGACG CCATTCCCCT CGACGGCCGC ATGGAAACAG CCACACGTCC GGAAAAACCG
GATGCCGGTC TTGAGACTGG TCTTGCCCCT GCCCTTCCCG AACCGACCCA AGAAGCGACC
ACCAAACTCA CCCTGGACAC ACTCGGCCTC GACACAACCG GTCTGAACGA GGCTCTGGAT
CTTTATCGCA AGGGTGATCT CGCCGCGGCG GACAAAGCCA CTGGCACACT CGTCAAGGAC
GATACAGTCC GCACCGCGAT CGAATGGATC GTTCTCCAAC GCTTCTCAAG CGGATTTACC
CGCCTGCAAG CCTTCGCCAA GGCGCATCCA CAATGGCCCG CGCAGGACTG GCTGCGCAAG
CGTTCCGAAG AAGCCCTTTA TAACGAGCGC AAGGTTTCGC CGGAAGGCCG TGCTTTTCTC
GAGGAGACGA CCCCCAAGAC GCCGGCGGGC AAGATCGCTC TCGCACGTCT CATGATCCTG
GACGACAAGC CGCAAGTAGC GGCGAAGCTC GTGCGCCAGG TCTGGCGGGA AAGCGATTTC
AGCACCGCCA TGGAAGCCAA GCTCAAAAGC GAATTCGGTT CCTTGCTCGA AAAGGCCGAT
TATAAGTACC GCGCCGAACG CTTTCTTTAT AAAGAGCAAG GGGCCGAGGC CATGCGCCTT
GCCTCGCTCG CCGGCCCGGA CATGGTTCCC CTGGTGCGTC TGCGCATCGC TTCGTTCGAG
GGAATCGCCA ACGACAAGCT CTTTGCGGCC GTCCCCGCCA GCCTGCAAAA TGACCCGGCT
TATCTTTTCG CTCGCATCCA AAAATTGCGG CGCAGCGAAA AAATTACCGA GGCCGCGACC
CTCATGCTCG GCGCGCCGCA TGATCCCGCT CGTCTCGTCA ATGGCGATGA ATGGTGGGTG
GAACGTCGGC TGATCGCCCG CAAGCTGCTC GATCAGAATG ATGCCGCCAC GGCCTATAAA
ATCTGCGCCG AACATTCGGC TGTCTCGCGC GACCTGCGTA TCGAAGCCGA ATTTCACGCC
GGTTGGATCG CCTTGCGATT CCTGCATGAT CCGGAAAAGG CCATGACGCA TTTCGCGCAA
GCCGCGCAAT TTGCCGAGAC GCCGATTTCC ATCGCGCGCG CGGCCTATTG GCAAGGCCGC
GCCGCCGAAG ACGACATGAG GGCCGAGGTG GCGGTCACCG CCAATGGATA TTATGGAAAA
GCCGCGCGGC AATCGGCGAC CTATTACGGT CAGCTCGCGC GCACCAAGCT GGGTCTGCCC
CTCGTGACAG AGGCACCCGC CCGCCATGCG CTTTTGCCGG CGGAACAGGA TCCCTCGATC
CGCATCATCG CCCTGCTGCA AGCCCTGGAT CAAAAGGATC TGGCGCAATC CCTGTCCATC
GCCGCCGCGC AGCATTTGGA AGGCGACGGC CAGATGGCCG CCCTGGCTGA TGTCGTCGAC
ACCCAGCATG ACGCGCATCT CGCTTTGATG ATTGGCAAGC TCGCAGGCTA TCGCGGCTAC
GCCTTGCAGA ATCTGGCCTT CCCGACCTAT GGCATTCCGA GTTTCGAGCC CTTGCCGAAT
TCGGCGGCCC GCTCGCTGGT CTATGCGATC GCGCGTCAGG AAAGCGCCTT CGACACCAAG
GCCGTTTCAT CGGCTGGAGC GCGTGGCGTC ATGCAGATGA TCGTCTCGAC AGCACGCCGC
ACTGCCGAGC GCGCCGGCAT TCCCTTCAAT GAGACGCGCC TGCTTTCCGA TGCCGCTTTC
AACGCGCAGC TCGCGGCCGC GCATCTCGGC GATCTCCTCG CGGAACAACG CGGCTCCTGG
ATCTTGACCT TCGCCGCCTA TAATGCCGGC GGCAAGAAGG TCAAACAATG GATCGATGCT
TATGGCGATC CACGCGATCC GGCAGTAGAT CCAATCGATT GGGTCGAGCG CATTCCCTTC
ACGGAAACCC GCAATTACGT CCAGAGAGTC GTCGAAAATC TCGCCATGTA TCAGCTTCGC
TTCGGCGAGG ATCATCGGGC TTTCGGCGAA GCCTTGCTGC GGCTCTCGCC GCCCAACCCC
GTCAGATTGT AA
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| Protein sequence | MASKRASKSL TKGAIALTIG AMAALGFHEM NLDGIRLKDK TPDAIPLDGR METATRPEKP
DAGLETGLAP ALPEPTQEAT TKLTLDTLGL DTTGLNEALD LYRKGDLAAA DKATGTLVKD
DTVRTAIEWI VLQRFSSGFT RLQAFAKAHP QWPAQDWLRK RSEEALYNER KVSPEGRAFL
EETTPKTPAG KIALARLMIL DDKPQVAAKL VRQVWRESDF STAMEAKLKS EFGSLLEKAD
YKYRAERFLY KEQGAEAMRL ASLAGPDMVP LVRLRIASFE GIANDKLFAA VPASLQNDPA
YLFARIQKLR RSEKITEAAT LMLGAPHDPA RLVNGDEWWV ERRLIARKLL DQNDAATAYK
ICAEHSAVSR DLRIEAEFHA GWIALRFLHD PEKAMTHFAQ AAQFAETPIS IARAAYWQGR
AAEDDMRAEV AVTANGYYGK AARQSATYYG QLARTKLGLP LVTEAPARHA LLPAEQDPSI
RIIALLQALD QKDLAQSLSI AAAQHLEGDG QMAALADVVD TQHDAHLALM IGKLAGYRGY
ALQNLAFPTY GIPSFEPLPN SAARSLVYAI ARQESAFDTK AVSSAGARGV MQMIVSTARR
TAERAGIPFN ETRLLSDAAF NAQLAAAHLG DLLAEQRGSW ILTFAAYNAG GKKVKQWIDA
YGDPRDPAVD PIDWVERIPF TETRNYVQRV VENLAMYQLR FGEDHRAFGE ALLRLSPPNP
VRL
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