| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1817 |
|---|
| Symbol | |
|---|
| ID | 6200738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2065539 |
|---|
| End bp | 2068004 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641705807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001832934 |
|---|
| Protein GI | 182678788 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4485] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.41308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.676829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTC TGGATACAGC GTCCCCCTAT TTTCCGTTCC AACGTCTTGG TCTTCGCCCC
GGCGCGTCGG ACATATCGGC TGAAGAGATC GAAACACCGG CCTGGACACG CCGCCAAACC
CTGCTGGCTA TCGTCAGCCT TCTGATCTTT TCGGGCCTCG CGCTGGCCTG CTGGTCCTGG
AGCGGCACGG TCGTGCCCTG GGATTCCAAG AACCATTTCT ATCCGATGTT CCGCTTCCTC
GCCGATACGC TGAGAGAAGG CCGGATCCCT TTGTGGAACC CCTATCATTT CGCCGGTCAT
CCATCGGTCG CAGATCCTCA ATCGCTGCTT TTCACACCCA CCATGGTCCT GTTCGCGCTG
ATTGCGCCGG ACGCTTCCAT GCAATTATTC GATACGATTA TTTTCGCGCA TCTCTGTTTT
GGTGGATTGG CGGTTGTGGG ACTTTGCCGC CGCTACCGCT GGCATCCGGC CGCCGCCGTG
CTCGCCGCCA TGATTTTCAT GCTGGGTGGC GCTGCATCCT CACGGTTGCA ACATACCGGG
ATGATCCTTT CCTATTCCTT CTTTCCAGCG GCCCTGTGGG CTCTGGAAGC CACTCTGGCC
CAACGGTCCT ATCGGGCCGC GCTTTTGTTG GGCGTCATGG CCGCATTGAT GTCGGTCGGG
CGTGATCAAG TAGCCTTTCT GTTCGATCTC GTTCTCGCCT TTCGCCTGGT TTTCGTCGCG
ATCGAATCCG GCAATCCTTT CGGCTTGCTG CGGTCGCGTC TTGGCGTCCT GTTTGTCGCC
GGCTTTGTCC TTCTGTCCTT GCTCATCGTG CCGATCCTGC TGACTTTGCA GTTTCTTGGC
ACCTCTAATC GGCCGGGCAT TCCGTTCGGC ATAGCGGCGG CGGGCTCGCT CGATCCCGCC
AATTTCGTCA CCATGTTCGT TCCCAATTTC TTCGGCTCGC TGGATGTGGG GTATGATTAT
TGGGGGCCGA ATTATGCGAC GGCCAGCGTT GCCGATTGGA CGGATCGCTC CGTCGATTAT
CTGTTCATCG GTACCTTGCC TTGCCTGCTG CTCATCTGGC ACGGTCTGGG GGCAGGGCGG
CTGTTTGAGC GCCGGGTTGC GTTCTATACA CTCGCCCTCG TTTTGGCGCT TGCTTATGCG
CTGGGCCGTT ATACGCCCTT TTTCAGCTTC GTTTTCGATT GGTGGCCGGG TGTTTCGCTC
TATCGCCGGC CCGCCGATGC CACGTTCATC GTCAATGTCG CCTTGGCCTT TTGCTCCGGC
TATCTGCTGC ATCATTTCAT CATGCGGGGC CTGCCACGTT CACTCTTCGC CGAGCATAAG
ATTCTCGTGC TTTTGCTCAT CGGGGTCAGC CTGTGCGGCC TTGGCGTGGT CCTGTATCAA
GGCTTGCTGT TCTCCGCGAA GGAAGGCCAC TTGGCGAGTT CCCTTGGTCA GCTCGGGCTC
GCCGCGGCTT TTGCGCTCTC CGGCATTTTG CTGCTGACGG TGTTTCGCTC TCCGCATCAG
CGGGCCATGG CGGCCTGTGT GCTCGTTGCC TTGACCGGAG CGGAGATCCT CTGGCGCAAT
GCGGCCTCGG CCTTGAATGC CGAACCGATC GATCGCTACG CCGTCTATGC GACCATGCCG
TCCTCCAATG CCGCGGGCAT CAGCAGCCTA CGGCATGAGC TCTCGACCAA AAGAGCGCAA
GGCGAACAGC CCCGCGTCGA AATTCTGGGC CTCAGCGGAC CTTGGCAGAA TGCTTCGATG
ATGCTGAAGC TCGAGGATAC GCTCGGTTAC AACCCCTTGC GCATCAATGA ATATGAGCGT
GCGGTCGGGC CTGGCGAAAA CGCTAGCGAT ATTAACCTGC GCCATTATCC GGGAACGTTC
CGTGGCTATA CCTGCCGCCT TGCGTCCCTG CTTGGTCTTG AATATCTCGT TCTCGATCGG
CCTCTGGAGA AGTTGCCCCG CCATGTCCCG CGGCCGCGCG ACGCGACTCT CATCCATGGC
GGCGATAATA TGTATATCTA CAAATTGGGT TCGGCGGCGC CGCGCGCCTA TTTCGCCACA
CGGGTCAAAC CCGTCGACGG CAATGATGCG ATCGATGATG CCGTCTGGCC GGGTTTCGAC
CGTGCCAATG AGGTTCTGAT CGACAAGAAC AGCATGGACG ATCTTGACGG TGAGGTGCTC
AATCGCGATG CGGCGAGCCT GCCCGCGCAA GCTCATGTGG CTATTACGAA TTATGAGGAA
AACCGGGTCA CGCTCTCGGT CGATACCGAT AAGGCGGGCG TGCTGGTGTT GCATGATCTG
TTCTATGCCG GATGGGAAGT ACGCGTCGAT GGCGAACGGC AACCTCTGTT ACACGCGAAC
ATTCTGTTCC GCGGTGTCGA GGTACCGGAA GGCCATCATG AGGTGGAATT CGTCTTCCGG
CCTTTCTCCT TCGCTAATCT CACGGCGGCT GCCACGGGCA TTTTGCATCG TCATGCCGAG
AATTGA
|
|---|
| Protein sequence | MSLLDTASPY FPFQRLGLRP GASDISAEEI ETPAWTRRQT LLAIVSLLIF SGLALACWSW
SGTVVPWDSK NHFYPMFRFL ADTLREGRIP LWNPYHFAGH PSVADPQSLL FTPTMVLFAL
IAPDASMQLF DTIIFAHLCF GGLAVVGLCR RYRWHPAAAV LAAMIFMLGG AASSRLQHTG
MILSYSFFPA ALWALEATLA QRSYRAALLL GVMAALMSVG RDQVAFLFDL VLAFRLVFVA
IESGNPFGLL RSRLGVLFVA GFVLLSLLIV PILLTLQFLG TSNRPGIPFG IAAAGSLDPA
NFVTMFVPNF FGSLDVGYDY WGPNYATASV ADWTDRSVDY LFIGTLPCLL LIWHGLGAGR
LFERRVAFYT LALVLALAYA LGRYTPFFSF VFDWWPGVSL YRRPADATFI VNVALAFCSG
YLLHHFIMRG LPRSLFAEHK ILVLLLIGVS LCGLGVVLYQ GLLFSAKEGH LASSLGQLGL
AAAFALSGIL LLTVFRSPHQ RAMAACVLVA LTGAEILWRN AASALNAEPI DRYAVYATMP
SSNAAGISSL RHELSTKRAQ GEQPRVEILG LSGPWQNASM MLKLEDTLGY NPLRINEYER
AVGPGENASD INLRHYPGTF RGYTCRLASL LGLEYLVLDR PLEKLPRHVP RPRDATLIHG
GDNMYIYKLG SAAPRAYFAT RVKPVDGNDA IDDAVWPGFD RANEVLIDKN SMDDLDGEVL
NRDAASLPAQ AHVAITNYEE NRVTLSVDTD KAGVLVLHDL FYAGWEVRVD GERQPLLHAN
ILFRGVEVPE GHHEVEFVFR PFSFANLTAA ATGILHRHAE N
|
|---|
| |