| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1759 |
|---|
| Symbol | |
|---|
| ID | 6200488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1993646 |
|---|
| End bp | 1994662 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641705750 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001832878 |
|---|
| Protein GI | 182678732 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.206949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACCGTC GGAATTTCGT CCGCAGCATT ACCAGCATGC GGCTCCTCGC CGAACTCGGC
CATGACCATG GGCTTTCCAT GCATACCTGT CTTGAGGGAA CAGGTGTTCG ACAACGCGAT
CTTTCCGACC CTTTGGGAAT AGTCTCGGCT GAGCAAGAGC TTCAGCTCAT CAGAAATTTG
TGGGCGCACA GAGGCAATTG CCCAGCTTTA GGGACACAGG CCGGTGCGCG CTATCATTTC
ACGGCCTATG GAATGCTTGG TTTCGCTATG GTGAGCAGCC CCACCTTACA GAGCGCATTC
GATATTTCGG TCAAATATTC TCAACTCACC TTTGCGTTCT CGCATTTCAA GCTGAAAGAA
TCAGAACATG AATCGAATAT AATCGTTGAC ACGTCTGACG TTCCGGAAGC ACTGCGTCAG
TTCATCACCG AACGCGATAT TGCGGCACTA TTGACTGTGC AGCGCGATCT TTTTCCATCG
CAACCAGTCT TGTATAATCT TTATTTTTCC TTCCCAAGGC CTGCGCGTTC TGATCACTAC
GAGGCCATCT ATGGTGTCAA GCCGATTTTC GGATGCAAAG AGACATTCGC TGAGCTCAAT
AGAAAAGCTT TGGCACAACC TTTACCGCAG GCAAACGAGC TCGCTCTAAA ATCGGCCGAG
GAACAATGCC AATTGGTCCT TGAACGCCGG TTATCGGGGA CAGGATTGGC TGTCAAAGTA
AGGGATCGGC TCCTTCATGG AGGTGTCAAC TTGCCCGATA TGAAAGACGT TGCCAAAGAT
CTTTGTGTGA CGCCACGCAC TTTGCACCGT CATCTCGAAG AGGAAGGGGT GACATTTCTG
GAATTACGTG ACGAAGTTCG TCTTACCCTG GCTGAAAATC TGCTACAGAA CCGCAACCTT
CTGGTTAAGG ATATTGCTTC TCGCTTAGGC TATTCCAGCG CAACATCCTT CATCAGCGCG
TTCAGGCGAT GGAAAGGCAT GACGCCGCTT GTGTATAGGA ACAGATTTCT ATCGTAA
|
|---|
| Protein sequence | MNRRNFVRSI TSMRLLAELG HDHGLSMHTC LEGTGVRQRD LSDPLGIVSA EQELQLIRNL
WAHRGNCPAL GTQAGARYHF TAYGMLGFAM VSSPTLQSAF DISVKYSQLT FAFSHFKLKE
SEHESNIIVD TSDVPEALRQ FITERDIAAL LTVQRDLFPS QPVLYNLYFS FPRPARSDHY
EAIYGVKPIF GCKETFAELN RKALAQPLPQ ANELALKSAE EQCQLVLERR LSGTGLAVKV
RDRLLHGGVN LPDMKDVAKD LCVTPRTLHR HLEEEGVTFL ELRDEVRLTL AENLLQNRNL
LVKDIASRLG YSSATSFISA FRRWKGMTPL VYRNRFLS
|
|---|
| |