| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1744 |
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| Symbol | |
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| ID | 6199242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 1975941 |
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| End bp | 1976993 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641705735 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001832863 |
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| Protein GI | 182678717 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00348418 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCGCA TTTCCCATTT CGTATGTGCT GCACTGGCAG GCCTCCTCGT TCTTGCGGAT
GCTTCGTCAC CTTTGCTGAG TCAGGAAAAA TCGCCTTTGC TCTCGGCAGG GGCGAAGGCG
CAAGCGGAGC TTCGTGGACT GATTGATCGC CTGCGCGGCA AAACGCTGCC GGATGGGATC
GTCGGTACCA ATGGCCGGGT CGAGGCGACG GAAGTCGATG TCTCGTCGAA ATATGGCGGC
CGGCTATCGG AACTCACCGT GAACGAAGGC GACGATGTCA CCGCTGGAGA AATCGTCGCA
CGTATTAGTT CACCCGAGAC CGAGGCGCAG CTGCGTGGCG CCCAGGCGCA AGTGTTGAAG
GCTAAGCAGG CGCTGGCCGA GGCCAAGGCT CTGATCGCCC AGCGCGCCGG CGATCTTGAC
TTCGCCCAAT CGGATTTCAA CCGTGGCCAG GCGCTTGTCC GGCAAGGTTA TCTGACAGAA
CAGACCTTTG ATATGCGGCG CTCGCGCTAT AATGTGGCAC AGGCTGCCCT CGACGCGGCC
AATGCCCAGC GCGACCAGGC CCAGTTCGCC ATTGATGCCG CCGAGGCCGA TGTCCAGCGG
CTCGAAGCCA TGCTCGTCGA TCTCGTCCTG AGGGCACCGG TCAACGGGCG CGTGCTCTAC
AAACTGGTGC AGAATGGCGA GGTCGTCGCA CCTGGCATGC GTGTCGTGAC GCTGCTCAAC
CTCAGCGACG TCTATATGTC GATCTATCTG CCGGCGAGTC AGGCCGGCTC CCTCTCCCTC
GGTGACGAGG CCCGCATCAT CCTCGATCCG GCGCCCGAAT ATGTCATTCC CACGACGATC
AGCTTCGTCG CGACCGAGGC GCAATTCACG CCGAAATCGG TCGAGACCGC CAGCGAGAGG
GAAAAGCTGA TGTTCCGTGT CAAGCTGCAG GCTGATCCGA AATTGCTCAA CAAATATGTC
AACCAGGTCA AGACGGGGGT ACGTGGCGTG GGCTATGTGC GCACCAATGT CAAAACGCCC
TGGCCGGACA ATCTGCAAGT GAAGCTTCCT TAA
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| Protein sequence | MMRISHFVCA ALAGLLVLAD ASSPLLSQEK SPLLSAGAKA QAELRGLIDR LRGKTLPDGI
VGTNGRVEAT EVDVSSKYGG RLSELTVNEG DDVTAGEIVA RISSPETEAQ LRGAQAQVLK
AKQALAEAKA LIAQRAGDLD FAQSDFNRGQ ALVRQGYLTE QTFDMRRSRY NVAQAALDAA
NAQRDQAQFA IDAAEADVQR LEAMLVDLVL RAPVNGRVLY KLVQNGEVVA PGMRVVTLLN
LSDVYMSIYL PASQAGSLSL GDEARIILDP APEYVIPTTI SFVATEAQFT PKSVETASER
EKLMFRVKLQ ADPKLLNKYV NQVKTGVRGV GYVRTNVKTP WPDNLQVKLP
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